DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rlb1 and bud22

DIOPT Version :10

Sequence 1:NP_477099.1 Gene:Rlb1 / 41139 FlyBaseID:FBgn0014022 Length:463 Species:Drosophila melanogaster
Sequence 2:NP_594749.1 Gene:bud22 / 2543574 PomBaseID:SPAC4F10.06 Length:388 Species:Schizosaccharomyces pombe


Alignment Length:405 Identity:85/405 - (20%)
Similarity:151/405 - (37%) Gaps:95/405 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 KLSTTDKEAK---WREEILETSKRRAKIERTEERKRKRKELKEQKAQTKNRLE-------WLEQN 173
            :||..|...|   ::::|.:..|:.:..||.:..:|.:.....:.|.|..|.|       ..:..
pombe    17 QLSVDDVPKKIPLFKKKISQALKKASTFERQKLVRRIKNCRASEDADTLGRFEAEFEFAKQFDFT 81

  Fly   174 KVVDADVNGATAETPTLQVSKVNDQEIPQSFAK--TENSPVLKVKKEKTPKTPAKKERN----LQ 232
            |.||........:....:  |:.::.:...|..  ||::....|.:....|..:...||    |:
pombe    82 KFVDYCYYKKILKNKDFR--KLLNENLHVDFPADLTEDAQRNTVARILNSKQLSDAIRNINSILE 144

  Fly   233 KKQAFDEQINPEITKLSSKK----------------------QNLNTIKENNAEPQLEGRPKE-- 273
            |...|   :||::.:||.||                      .|.:.:...:.:...:|..::  
pombe   145 KYLRF---LNPDLQELSDKKAVSSTQKPIKTIGKVDLSNKSTSNQDQVDNTHVQNSTDGVNQDTG 206

  Fly   274 -----SKPKPFEKKPAREQKPK----------PRLERQPSIDEE--EPQLDNNRPTHVVDPFFIT 321
                 ::.|...|..:...|.:          ..:.|:..||:|  |..|..:..|::       
pombe   207 MILDNTEDKEINKSMSYSMKNEGVKESSLQNATLINRKSIIDDEMLEIPLGKHNNTNL------- 264

  Fly   322 ESGQPYLSSAVVLSGDNDSEADEEQAP----PPVKRFRNEDRRSNTYREKPERQPEFKARKPTDD 382
                |.|::..:...::|.|..|::..    |..|..|.:..|...:.:|..:......:|.|::
pombe   265 ----PALTAGFLDPVESDDEFVEKELEEVDIPKRKNRRGQRARQAIWEKKYGKGANHLIKKATEE 325

  Fly   383 RHPSWLAKQQQKPIIGDFRGKKITFGDDGQAAEIIAPSINQLTATAAPLPTDGMHPSWVAKQKFK 447
            |.            |.:.|.:|.   ::.||..  |...|..|....|...:.:||||.||:|.|
pombe   326 RS------------IREERQRKY---EERQAKR--AARENAFTEHQTPQKPEQLHPSWEAKRKQK 373

  Fly   448 -PKIAAFQGTKIKFD 461
             |..|||||.||.||
pombe   374 MPSSAAFQGKKIVFD 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rlb1NP_477099.1 PTZ00108 <3..345 CDD:240271 49/282 (17%)
BUD22 <367..461 CDD:401132 29/94 (31%)
bud22NP_594749.1 BUD22 32..388 CDD:401132 79/388 (20%)

Return to query results.
Submit another query.