| Sequence 1: | NP_649899.1 | Gene: | rump / 41138 | FlyBaseID: | FBgn0267790 | Length: | 632 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_005269298.1 | Gene: | SART3 / 9733 | HGNCID: | 16860 | Length: | 981 | Species: | Homo sapiens |
| Alignment Length: | 373 | Identity: | 74/373 - (19%) |
|---|---|---|---|
| Similarity: | 135/373 - (36%) | Gaps: | 126/373 - (33%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 49 DRSRERRNCRVYISNIPYDYRWQD--LKDLFRRIVGSIEYVQLFFDESGKARGCGIVEFKDPENV 111
Fly 112 QKALEKMNRYEVNGRELVVKEDHGEQRDQYGRIVRDGGGGGGGGGGVQGGNGGNNGGGGGGGRDH 176
Fly 177 MDDRDRGFSRRDDDRLSGRNNFNMMSNDYNNSSNYNLYGLSASFLESLGISGPLHNKVFVANLDY 241
Fly 242 KVDNKKLKQVFKLAGKVQSVDLSLDKEGNSRGFAVIEYDHPVEAVQAISMLDRQMLFDRRMTVRL 306
Fly 307 D-----RIPDKNEGIKLPEGLGGVGIGLGPNGEPLRDVAHNLPNGGQSQGQLLGNAQQGSQLGSV 366
Fly 367 GSQPNSSAVSNATTNLLNNLTGVMFGNHAAVQPSPVAP--VQKPSLGN 412 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rump | NP_649899.1 | PABP-1234 | 48..435 | CDD:130689 | 74/373 (20%) |
| RRM1_hnRNPM_like | 58..133 | CDD:240831 | 27/76 (36%) | ||
| RRM2_hnRNPM_like | 234..307 | CDD:240832 | 17/72 (24%) | ||
| RRM | <543..>631 | CDD:223796 | |||
| RRM_SF | 565..630 | CDD:302621 | |||
| SART3 | XP_005269298.1 | RNA14 | 100..>478 | CDD:227438 | |
| NRDE-2 | 351..>504 | CDD:285605 | |||
| RRM | 654..876 | CDD:223796 | 49/241 (20%) | ||
| RRM1_SART3 | 723..796 | CDD:240837 | 26/74 (35%) | ||
| RRM2_SART3 | 817..897 | CDD:240838 | 19/87 (22%) | ||
| LSM_int_assoc | 895..951 | CDD:293211 | 15/90 (17%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 0 | 0.000 | |||||