Protein Alignment rump and RIE1

DIOPT Version :9

• Sequence 1: NP_649899.1
• Gene: rump / 41138
• FlyBaseID: FBgn0267790
• Length: 632
• Species: Drosophila melanogaster
• Sequence 2: NP_011766.3
• Gene: RIE1 / 853165
• SGDID: S000003482
• Length: 781
• Species: Saccharomyces cerevisiae
• Alignment Length: 445
• Identity: 86/445 - (19%)
• Similarity: 140/445 - (31%)
• Gaps: 165/445 - (37%)

  Fly    82 GSIEYVQLFFDESGKA------RGCGIVEFKDPENVQKALEKMNRYEVNGRELVVKEDHGEQRDQ 140
            ||:|..:...:.:|.|      :|.|.::..:.|....|:|..|.:..:|..|||.:  ..|...
Yeast   359 GSVESNKSSNNTNGNAQDEDMLKGYGFIKLINHEQALAAIETFNGFMWHGNRLVVNK--AVQHKV 421

  Fly   141 YGRIVRDGGGGGGGGGGVQGGNGGNNGGGGGGGRDHMDDRDRGFSRRDD---------------- 189
            |                       ||        .:..||....|..:|
Yeast   422 Y-----------------------NN--------HNSHDRHPSISNHNDMEVLEFANNPMYDYNN 455

  Fly   190 ---DRLSGRNNFNMMSNDYNNSSNYN-------------LYGLSASFLESLG------------- 225
               ||....||.|..|||.:|...::             .|....||.|..|
Yeast   456 YTYDRYYFNNNKNGNSNDTSNVRYFDSVRSTPVAEKMDLFYPQRESFSEGRGQRVPRFMGNKFDM 520

  Fly   226 -------------ISGPLHNKVFVANLDYKVDNKKLKQVFKLAGKV-----------------QS 260
                         :|....:.::|.::.....::.|...:|..|::                 ||
Yeast   521 YQYPSTSYSLPIPMSNQQESNLYVKHIPLSWTDEDLYDFYKSFGEIISVKVITVGGSKNKYRQQS 585

  Fly   261 VDLSLDKE---GNSRGFAVIEYDHPVEAVQAISMLD-RQMLFDRRMTVRL------------DRI 309
            .|.|.|.:   |:|||:..:.::.|::|.:||...| .|:..|:.::|..            |..
Yeast   586 NDSSSDNDLPVGSSRGYGFVSFESPLDAAKAILNTDGYQVSKDQVLSVSFAQKRGNLSSSDDDDQ 650

  Fly   310 PDKNEGIKLPEGLGGVGIGLGPNGEPLRDVAHNLP--------NGGQSQGQLLGNAQQGS----- 361
            ...:...|.            .|.:|..|.....|        |...:|.|   :.||.|
Yeast   651 SQTDNSSKF------------QNFQPHNDYHKAYPTKYNKKFINALMTQNQ---SQQQVSRENYF 700

  Fly   362 ---QLGSVGSQP-NSSAVSNATTNLLNNLTGVM--FGNHAAVQPSP-VAPVQKPS 409
               |..:..::| ||..:.:|..|..|.:..:.  ||....|.|.| :.|.|.|:
Yeast   701 IPLQYPNTNTKPVNSYNLISANQNNANWMMPMFPSFGFIPQVPPVPYIIPPQNPA 755

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rump	NP_649899.1	PABP-1234	48..435	CDD:130689	86/445 (19%)
		RRM1_hnRNPM_like	58..133	CDD:240831	15/56 (27%)
		RRM2_hnRNPM_like	234..307	CDD:240832	21/105 (20%)
		RRM	<543..>631	CDD:223796
		RRM_SF	565..630	CDD:302621
RIE1	NP_011766.3	PABP-1234	195..757	CDD:130689	86/445 (19%)
		RRM3_CELF1-6	542..634	CDD:409797	20/91 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0724
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900