Sequence 1: | NP_649899.1 | Gene: | rump / 41138 | FlyBaseID: | FBgn0267790 | Length: | 632 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_011672.1 | Gene: | PTI1 / 853060 | SGDID: | S000003388 | Length: | 425 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 234 | Identity: | 56/234 - (23%) |
---|---|---|---|
Similarity: | 87/234 - (37%) | Gaps: | 50/234 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 196 NNFNMMSNDYNNSSNYNLYGLSASFLE-----SLGISGPLHNKVFVANLDYKVDNKKLK-QVFKL 254
Fly 255 AGKVQSVDLSLDKEGNSRGFAVIEYDHPVEA-VQAISMLDRQMLFDRRMTVRLDRIPDKNEGIKL 318
Fly 319 PEGLGGVGIGLGPNGEPLRDVAHNLPNGGQSQGQLLGNAQQGSQLGSVGSQPNSSAVSNATTNLL 383
Fly 384 NNLTGVMFGNHAAVQPSP------------VAPVQKPSL 410 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rump | NP_649899.1 | PABP-1234 | 48..435 | CDD:130689 | 56/234 (24%) |
RRM1_hnRNPM_like | 58..133 | CDD:240831 | |||
RRM2_hnRNPM_like | 234..307 | CDD:240832 | 18/74 (24%) | ||
RRM | <543..>631 | CDD:223796 | |||
RRM_SF | 565..630 | CDD:302621 | |||
PTI1 | NP_011672.1 | RRM | 21..90 | CDD:214636 | |
CSTF2_hinge | 185..255 | CDD:405077 | 13/56 (23%) | ||
PABP-1234 | <306..413 | CDD:130689 | 31/122 (25%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0724 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |