| Sequence 1: | NP_649899.1 | Gene: | rump / 41138 | FlyBaseID: | FBgn0267790 | Length: | 632 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_009916.1 | Gene: | GBP2 / 850346 | SGDID: | S000000517 | Length: | 427 | Species: | Saccharomyces cerevisiae |
| Alignment Length: | 501 | Identity: | 110/501 - (21%) |
|---|---|---|---|
| Similarity: | 169/501 - (33%) | Gaps: | 202/501 - (40%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 6 SNSVESREKERDRRGRGAR----------GSRFTD-------ADGNGNGA-----GSQGGG---- 44
Fly 45 ---VAARDRSRE----RRNCR--VYISNIPYDYRWQDLKDLFRRIVGSIEYVQLFFDESGKARGC 100
Fly 101 GIVEFKDPENVQKALEKMNRYEVNGRELVVKEDH--GEQRDQYGRIVRDGGGGGGGGGGVQGGNG 163
Fly 164 GNNGGGGGGGRDHMDDRDRGFSRRDDDRLSGRNNFNMMSNDYNNSSNYNLYGLSASFLESLGISG 228
Fly 229 PLHNKVFVANLDYKVDNKKLKQVFKLAGKVQSVDLSLDKEGNSRGFAVIEYDHPVEAVQAISMLD 293
Fly 294 RQMLFDRRMTVR---------LDRIPDKNEGIKLPEGL-------GGVGI---------GLGPNG 333
Fly 334 EPLRD---VAHNLPNGGQSQGQLLGNAQQGSQLGSVGSQPNSSAVSNATTNLLNNLTGVMFG--- 392
Fly 393 --NHAAV------QPSPVAPVQKPSLG---------NNTGSGGLNL 421 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rump | NP_649899.1 | PABP-1234 | 48..435 | CDD:130689 | 91/430 (21%) |
| RRM1_hnRNPM_like | 58..133 | CDD:240831 | 24/76 (32%) | ||
| RRM2_hnRNPM_like | 234..307 | CDD:240832 | 26/81 (32%) | ||
| RRM | <543..>631 | CDD:223796 | |||
| RRM_SF | 565..630 | CDD:302621 | |||
| GBP2 | NP_009916.1 | RRM1_HRB1_GBP2 | 121..197 | CDD:410184 | 24/77 (31%) |
| RRM2_HRB1_GBP2 | 218..292 | CDD:410185 | 26/121 (21%) | ||
| RRM3_HRB1_GBP2 | 347..425 | CDD:410186 | 22/108 (20%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C157344109 | |
| Domainoid | 1 | 1.000 | 52 | 1.000 | Domainoid score | I2835 |
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 1 | 0.900 | - | - | OOG6_103495 | |
| Panther | 1 | 1.100 | - | - | O | PTHR23003 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4422 |
| SonicParanoid | 1 | 1.000 | - | - | X1365 | |
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 7 | 6.870 | |||||