DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment rump and AT4G09040

DIOPT Version :9

Sequence 1:	NP_649899.1	Gene:	rump / 41138	FlyBaseID:	FBgn0267790	Length:	632	Species:	Drosophila melanogaster
Sequence 2:	NP_192643.2	Gene:	AT4G09040 / 826483	AraportID:	AT4G09040	Length:	304	Species:	Arabidopsis thaliana

Alignment Length:	299	Identity:	52/299 - (17%)
Similarity:	98/299 - (32%)	Gaps:	100/299 - (33%)

- Green bases have known domain annotations that are detailed below.

  Fly    58 RVYISNIPYDYRWQDLKDLFRRIVGSIEYVQLFFDESGKARGCGIVEFKDPENVQKALEKMNRYE 122
            |:...|:|:....:|::.||.: .||:..:::...:..:.||...:|...||....||:.:...|
plant    95 RLIAQNVPWTSTPEDIRSLFEK-YGSVIDIEMSMHKKERNRGLVFIEMASPEEAATALKSLESCE 158

  Fly   123 VNGRELVVKEDHGEQRDQYGRIVRDGGGGGGGGGGVQGGNGGNNGGGGGGGRDHMDDRDRGFSRR 187
            ..||.|  |.|:.:.:                                         :.:.::.|
plant   159 YEGRRL--KVDYAKTK-----------------------------------------KKKTYAPR 180

  Fly   188 DDDRLSGRNNFNMMSNDYNNSSNYNLYGLSASFLESLGISGPLHNKVFVANLDYKVDNKKLKQVF 252
            :..  |....||:                                  |||||.::...|.||:.|
plant   181 ETP--SPVPTFNL----------------------------------FVANLAFEARAKHLKEFF 209

  Fly   253 KL-AGKVQSVDLSL-DKEGNSRGFAVIEYDHPVEAVQAISMLDRQMLFDRRMTVRLDRIPDKNEG 315
            .. .|.|.|.::.. :....|.|:..:.:....:|..|:.....:....|.:     |:....:.
plant   210 DADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEAALIEFQGKDFLGRPI-----RLAKSKQF 269

  Fly   316 IKL--PEGLGGVGIGLGPNGEPLRDVAHNLPNGGQSQGQ 352
            :||  .|||           :|..:.|...|:..::..|
plant   270 VKLQAKEGL-----------QPPEEEAEEEPSQSETMTQ 297

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
rump	NP_649899.1	PABP-1234	48..435	CDD:130689	52/299 (17%)
		RRM1_hnRNPM_like	58..133	CDD:240831	20/74 (27%)
		RRM2_hnRNPM_like	234..307	CDD:240832	17/74 (23%)
		RRM	<543..>631	CDD:223796
		RRM_SF	565..630	CDD:302621
AT4G09040	NP_192643.2	RRM_SF	100..167	CDD:409669	19/69 (28%)
AT4G09040	NP_192643.2	RRM	190..263	CDD:214636	18/111 (16%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR23003
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.100