| Sequence 1: | NP_649899.1 | Gene: | rump / 41138 | FlyBaseID: | FBgn0267790 | Length: | 632 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_190636.1 | Gene: | U1-70K / 824230 | AraportID: | AT3G50670 | Length: | 427 | Species: | Arabidopsis thaliana |
| Alignment Length: | 187 | Identity: | 49/187 - (26%) |
|---|---|---|---|
| Similarity: | 78/187 - (41%) | Gaps: | 42/187 - (22%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 174 RDHMDDRDRGFSRRDDDRLSGRNNFNMMSNDYNNSSNYNLYGLSASFLESLGISGPLHNKVFVAN 238
Fly 239 LDYKVDNKKLKQVFKLAGKVQSVDLSLDKEGNS-RGFAVIEYDHPVEAVQAISMLDRQMLFDRRM 302
Fly 303 TVRLDR---IPDKNEGIKLPEGLGGVGIGLGPN----GEPLRDVAHNLPNGGQSQGQ 352 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rump | NP_649899.1 | PABP-1234 | 48..435 | CDD:130689 | 49/187 (26%) |
| RRM1_hnRNPM_like | 58..133 | CDD:409819 | |||
| RRM2_hnRNPM_like | 234..307 | CDD:409820 | 24/73 (33%) | ||
| RRM_SF | 565..629 | CDD:473069 | |||
| U1-70K | NP_190636.1 | U1snRNP70_N | 40..129 | CDD:432406 | 6/33 (18%) |
| RRM_snRNP70 | 137..227 | CDD:409682 | 27/94 (29%) | ||
| PRK12678 | 245..>395 | CDD:237171 | 4/12 (33%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||