Protein Alignment rump and AT3G48840

DIOPT Version :9

• Sequence 1: NP_649899.1
• Gene: rump / 41138
• FlyBaseID: FBgn0267790
• Length: 632
• Species: Drosophila melanogaster
• Sequence 2: NP_190453.4
• Gene: AT3G48840 / 824045
• AraportID: AT3G48840
• Length: 189
• Species: Arabidopsis thaliana
• Alignment Length: 87
• Identity: 29/87 - (33%)
• Similarity: 43/87 - (49%)
• Gaps: 9/87 - (10%)

  Fly    45 VAARDRSRERRNCRVYISNIPYDYRWQDLKDLFRRIVGSIEYVQLFFDESGKARGCGIVEFKDPE 109
            ||.|.::       ::|:|:|.......:.:.||. ||.:..|:|..|..||..|||.|||....
plant    35 VAVRKKT-------LFIANLPLKSEMPHIINFFRD-VGEVVSVRLIVDHRGKHVGCGFVEFASAY 91

  Fly   110 NVQKA-LEKMNRYEVNGRELVV 130
            ..:|| |||.|...:..|.:|:
plant    92 KAKKAPLEKKNLRRLRNRYVVL 113

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rump	NP_649899.1	PABP-1234	48..435	CDD:130689	27/84 (32%)
		RRM1_hnRNPM_like	58..133	CDD:240831	26/74 (35%)
		RRM2_hnRNPM_like	234..307	CDD:240832
		RRM	<543..>631	CDD:223796
		RRM_SF	565..630	CDD:302621
AT3G48840	NP_190453.4	RRM	<2..>150	CDD:223796	29/87 (33%)
		RRM_SF	41..117	CDD:302621	26/81 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1174365at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920