Sequence 1: | NP_649899.1 | Gene: | rump / 41138 | FlyBaseID: | FBgn0267790 | Length: | 632 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_683549.1 | Gene: | AT3G10845 / 820254 | AraportID: | AT3G10845 | Length: | 423 | Species: | Arabidopsis thaliana |
Alignment Length: | 266 | Identity: | 54/266 - (20%) |
---|---|---|---|
Similarity: | 103/266 - (38%) | Gaps: | 36/266 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 59 VYISNIPYDYRWQDLKDLFRRIVGSIEYVQLFFDESGKARGCGIVEFKDPENVQKALEKMNRYEV 123
Fly 124 NGRELVVKEDHGEQRD-QYGRIVRDGGGGGGGGGGVQGGNGGNNGGGGGGGRDHMDDRDRGFSRR 187
Fly 188 DDDRLSGRNNFNMMSN----------DY--NNSSNYNLYGLSAS--FLESLGISGPLHNKVFVAN 238
Fly 239 LDYKVDNKKLKQVFKLAGKVQSVDLSLDKEGNSRGFAVIEYDHPVEAVQAISMLDRQMLFDRRMT 303
Fly 304 VRLDRI 309 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rump | NP_649899.1 | PABP-1234 | 48..435 | CDD:130689 | 54/266 (20%) |
RRM1_hnRNPM_like | 58..133 | CDD:240831 | 18/73 (25%) | ||
RRM2_hnRNPM_like | 234..307 | CDD:240832 | 16/72 (22%) | ||
RRM | <543..>631 | CDD:223796 | |||
RRM_SF | 565..630 | CDD:302621 | |||
AT3G10845 | NP_683549.1 | RRM_SF | 129..197 | CDD:240668 | 18/68 (26%) |
RRM_SF | <213..248 | CDD:302621 | 5/48 (10%) | ||
RRM_SF | 299..369 | CDD:240668 | 16/70 (23%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1174365at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |