Protein Alignment rump and RS2Z33

DIOPT Version :10

• Sequence 1: NP_649899.1
• Gene: rump / 41138
• FlyBaseID: FBgn0267790
• Length: 632
• Species: Drosophila melanogaster
• Sequence 2: NP_850280.1
• Gene: RS2Z33 / 818311
• AraportID: AT2G37340
• Length: 290
• Species: Arabidopsis thaliana
• Alignment Length: 296
• Identity: 55/296 - (18%)
• Similarity: 100/296 - (33%)
• Gaps: 80/296 - (27%)

  Fly   231 HNKVFVANLDYKVDNKKLKQVFKLAGKVQSVDLSLDKEGNSRGFAVIEYDHPVEAVQAISMLDRQ 295
            :.:::|..|..:...:.|:::|...|:|:.||:       .|.:|.:|:..|.:|..|...||.:
plant    10 NTRLYVGRLSSRTRTRDLERLFSRYGRVRDVDM-------KRDYAFVEFGDPRDADDARHYLDGR 67

  Fly   296 MLFDRRMTVRLDRIPDKN----EGIKLPEGLGGVGIGLGPNGEPLRDV--------AHNLPNGGQ 348
            .....|:||...|...:.    :....|.|.|.. ...|.:|...||.        .:.....|.
plant    68 DFDGSRITVEFSRGAPRGSRDFDSRGPPPGAGRC-FNCGVDGHWARDCTAGDWKNKCYRCGERGH 131

  Fly   349 SQGQLLGNAQQGSQLGSVGSQP-----------------NSSAVSNATTNLLNNLTGVMFGNHA- 395
            .:.....:.::..:.||....|                 .|.:.|.:.:.:......|...:.:
plant   132 IERNCKNSPKKLRRSGSYSRSPVRSRSPRRRRSPSRSLSRSRSYSRSRSPVRRRERSVEERSRSP 196

  Fly   396 -----AVQP-----SPV------------APVQKPSLGNNTGS---GGLNLNNLNPSILAAVVGN 435
                 ::.|     |||            :|...|.|....||   ||...:|...|:::.|||.
plant   197 KRMDDSLSPRARDRSPVLDDEGSPKIIDGSPPPSPKLQKEVGSDRDGGSPQDNGRNSVVSPVVGA 261

  Fly   436 LGNQGGNLSNPLLSSSLSNLGLNLGNSGNDDNLPPS 471
            .|:......:|:                 ||:..|:
plant   262 GGDSSKEDRSPV-----------------DDDYEPN 280

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rump	NP_649899.1	PABP-1234	48..435	CDD:130689	49/258 (19%)
		RRM1_hnRNPM_like	58..133	CDD:409819
		RRM2_hnRNPM_like	234..307	CDD:409820	19/72 (26%)
		RRM_SF	565..629	CDD:473069
RS2Z33	NP_850280.1	RRM_SF	12..81	CDD:473069	19/75 (25%)
		PTZ00368	<86..144	CDD:173561	8/58 (14%)