Sequence 1: | NP_649899.1 | Gene: | rump / 41138 | FlyBaseID: | FBgn0267790 | Length: | 632 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_997793.1 | Gene: | tia1 / 793165 | ZFINID: | ZDB-GENE-030131-1506 | Length: | 386 | Species: | Danio rerio |
Alignment Length: | 411 | Identity: | 80/411 - (19%) |
---|---|---|---|
Similarity: | 138/411 - (33%) | Gaps: | 111/411 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 59 VYISNIPYDYRWQDLKDLFRRIVGSIEYVQLFFDESGKARGCGIVEFKDPENVQKALEKMNRYEV 123
Fly 124 NGRELVV---------KEDHGEQ-------------------------RDQYGRIVRDGGGGGGG 154
Fly 155 GGG-------------VQGGNGGNNGGGGGGGRDHMDDRDRGFSRRDDDRLSGRNNFNMMSNDYN 206
Fly 207 NSSNYNLYGLSASFLESLGISGPLHNKVFVANLDYKVDNKKLKQVFKLAGKVQSVDLSLDKEGNS 271
Fly 272 RGFAVIEYDHPVEAVQAISMLDRQML--------FDRRMTVRLDRIPDKNEGIKLPEGLGGVGIG 328
Fly 329 LGPNGE------PLRDVAHNLPNG---------GQSQGQL-LGNAQQGSQLGSVGSQPNSSAVSN 377
Fly 378 AT----TNLLNNLTGVMFGNH 394 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rump | NP_649899.1 | PABP-1234 | 48..435 | CDD:130689 | 80/411 (19%) |
RRM1_hnRNPM_like | 58..133 | CDD:240831 | 20/82 (24%) | ||
RRM2_hnRNPM_like | 234..307 | CDD:240832 | 13/80 (16%) | ||
RRM | <543..>631 | CDD:223796 | |||
RRM_SF | 565..630 | CDD:302621 | |||
tia1 | NP_997793.1 | ELAV_HUD_SF | 6..270 | CDD:273741 | 54/290 (19%) |
RRM1_TIA1 | 9..82 | CDD:241059 | 19/73 (26%) | ||
RRM2_TIA1 | 95..174 | CDD:241062 | 14/86 (16%) | ||
RRM3_TIA1 | 204..277 | CDD:241065 | 12/77 (16%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0724 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |