| Sequence 1: | NP_649899.1 | Gene: | rump / 41138 | FlyBaseID: | FBgn0267790 | Length: | 632 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_084080.1 | Gene: | Hnrnpm / 76936 | MGIID: | 1926465 | Length: | 729 | Species: | Mus musculus |
| Alignment Length: | 754 | Identity: | 212/754 - (28%) |
|---|---|---|---|
| Similarity: | 316/754 - (41%) | Gaps: | 217/754 - (28%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 34 NGNGA-GSQGGGVAARDRSRERRNC-----------------RVYISNIPYDYRWQDLKDLFRRI 80
Fly 81 VGSIEYVQLFFDESGKARGCGIVEFKDPENVQKALEKMNRYEVNGRELVVKED-HGEQ-RDQYGR 143
Fly 144 IVRDGGGGGGGGGGVQGGNGGNNGGGGGGGRDHMDDRDRGFSRRDDDRLSGRNNF--NMMSNDYN 206
Fly 207 NSSNYNLYGLSASFLESLGISGPLHNKVFVANLDYKVDNKKLKQVFKLAGKVQSVDLSLDKEGNS 271
Fly 272 RGFAVIEYDHPVEAVQAISMLDRQMLFDRRMTVRLDR---------IPDKNEGIKLPEGLGGVGI 327
Fly 328 GLGPNGEPLRDVAH--------NL-PNG-------------GQSQGQLLGNAQQGSQLGSVGSQP 370
Fly 371 NSSAVSNATTNLLNNLTGVMF---GNHAAVQPSPVAPVQKPSLGNNTGSG--------GLNLNNL 424
Fly 425 NPSI--LAAVVGNLGN---QGGNLS--NPL----LSSSLSNLGLNLGNSGND------------- 465
Fly 466 ----------------------------------DNLPPSNVGLS--------NNYSSG--GTGG 486
Fly 487 GNSYSSGNNYSGGG-----GSSNLGYNAYSSSG-------GMG--------GGNGGVGVD-GNDY 530
Fly 531 NTGNPLDVYGGGSNVGNSNVGSANAVGASRKSDTIIIKNVPITCTWQTLRDKFREIGDVKFAEI- 594
Fly 595 ----RGNDVGVVRFFKERDAELAIALMDGSRLDGRNIKV 629 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rump | NP_649899.1 | PABP-1234 | 48..435 | CDD:130689 | 140/451 (31%) |
| RRM1_hnRNPM_like | 58..133 | CDD:240831 | 37/74 (50%) | ||
| RRM2_hnRNPM_like | 234..307 | CDD:240832 | 41/72 (57%) | ||
| RRM | <543..>631 | CDD:223796 | 34/92 (37%) | ||
| RRM_SF | 565..630 | CDD:302621 | 28/70 (40%) | ||
| Hnrnpm | NP_084080.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..65 | 8/35 (23%) | |
| HnRNP_M | 40..69 | CDD:288396 | 2/28 (7%) | ||
| RRM1_hnRNPM | 71..146 | CDD:241101 | 37/74 (50%) | ||
| RRM2_hnRNPM_like | 205..278 | CDD:240832 | 41/72 (57%) | ||
| 27 X 6 AA repeats of [GEVSTPAN]-[ILMV]-[DE]-[RH]-[MLVI]-[GAV] | 399..607 | 29/207 (14%) | |||
| RRM3_hnRNPM | 653..729 | CDD:241105 | 28/71 (39%) | ||
| RRM | <654..>729 | CDD:223796 | 28/70 (40%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C167845373 | |
| Domainoid | 1 | 1.000 | 99 | 1.000 | Domainoid score | I7069 |
| eggNOG | 1 | 0.900 | - | - | E1_COG0724 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 242 | 1.000 | Inparanoid score | I3303 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 1 | 1.010 | - | - | QHG48675 | |
| OrthoDB | 1 | 1.010 | - | - | D1174365at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0003017 | |
| OrthoInspector | 1 | 1.000 | - | - | otm43145 | |
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | LDO | PTHR23003 |
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4422 |
| SonicParanoid | 1 | 1.000 | - | - | X1365 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| 12 | 11.990 | |||||