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Protein Alignment rump and Snrnp35
DIOPT Version :9
Sequence 1: | NP_649899.1 |
Gene: | rump / 41138 |
FlyBaseID: | FBgn0267790 |
Length: | 632 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_083808.1 |
Gene: | Snrnp35 / 76167 |
MGIID: | 1923417 |
Length: | 244 |
Species: | Mus musculus |
Alignment Length: | 142 |
Identity: | 40/142 - (28%) |
Similarity: | 65/142 - (45%) |
Gaps: | 24/142 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 218 ASFLESLGISGPLHNKVFVANLDYKVDNKKLKQVFKLAGKVQSVDLSLD-KEGNSRGFAVIEYDH 281
|.::.:.|::|.....:|||.|:.:...:|||:||...|.::.:.|..| ..|.|:|:|.|||..
Mouse 37 ARYVPNKGVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKE 101
Fly 282 PVEAVQAIS-----MLDRQMLFDRRMTVRLDR-----IPDKNEGIKLPEGLGGV----GIGLGPN 332
....::|.. ::|:..:| :...|:| ||.:..| ||||. .:..|..
Mouse 102 ERALMKAYRDADGLVIDQHEIF---VDYELERTLRGWIPRRLGG-----GLGGKKESGQLRFGGR 158
Fly 333 GEPLRDVAHNLP 344
..|.|... |||
Mouse 159 DRPFRKPI-NLP 169
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG0724 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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