Sequence 1: | NP_649899.1 | Gene: | rump / 41138 | FlyBaseID: | FBgn0267790 | Length: | 632 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001103022.1 | Gene: | Srsf1 / 689890 | RGDID: | 1587490 | Length: | 248 | Species: | Rattus norvegicus |
Alignment Length: | 256 | Identity: | 66/256 - (25%) |
---|---|---|---|
Similarity: | 95/256 - (37%) | Gaps: | 86/256 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 42 GGGVAARDRSRERRNCRVYISNIPYDYRWQDLKDLFRRIVGSIEYVQLFFDESGKARGCG----I 102
Fly 103 VEFKDPENVQKALEKMNRYEVNGRELVVKEDHGEQRDQYGRIVRDGGGGGGGGGGVQGGNGGNNG 167
Fly 168 GGGGGGRDHMDDRDRGFSRRDDDRLSGRNNFNMMSNDYNNSSNYNLYGLSASFLESLGISGPLHN 232
Fly 233 KVFVANLDYKVDNKKLKQVFKLAGKVQSVDLSLDKEGNSRGFAVIEYDHPVEAVQAISMLD 293 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rump | NP_649899.1 | PABP-1234 | 48..435 | CDD:130689 | 62/250 (25%) |
RRM1_hnRNPM_like | 58..133 | CDD:240831 | 25/78 (32%) | ||
RRM2_hnRNPM_like | 234..307 | CDD:240832 | 16/60 (27%) | ||
RRM | <543..>631 | CDD:223796 | |||
RRM_SF | 565..630 | CDD:302621 | |||
Srsf1 | NP_001103022.1 | RRM1_SRSF1 | 12..90 | CDD:410010 | 26/98 (27%) |
RRM2_SRSF1 | 113..196 | CDD:410160 | 19/79 (24%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0724 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |