Protein Alignment rump and Srsf6

DIOPT Version :10

• Sequence 1: NP_649899.1
• Gene: rump / 41138
• FlyBaseID: FBgn0267790
• Length: 632
• Species: Drosophila melanogaster
• Sequence 2: NP_080775.3
• Gene: Srsf6 / 67996
• MGIID: 1915246
• Length: 339
• Species: Mus musculus
• Alignment Length: 244
• Identity: 62/244 - (25%)
• Similarity: 99/244 - (40%)
• Gaps: 40/244 - (16%)

  Fly     2 SMDASNSV---ESREKERDR----RGRGARGSRFTDADGNGNGAGSQGGGVAARDRSRE------ 53
            |.||.::|   .|:|...:|    ..||.|    .|.||...|:.|.|||.::|..|..
Mouse    45 SRDADDAVYELNSKELCGERVIVEHARGPR----RDRDGYSYGSRSGGGGYSSRRTSGRDKYGPP 105

  Fly    54 -RRNCRVYISNIPYDYRWQDLKDLFRRIVGSIEYVQLFFDESGKARGCGIVEFKDPENVQKALEK 117
             |...|:.:.|:.....|||||| |.|..|.:.|.....:.:.:    |::||:...::::||:|
Mouse   106 VRTEYRLIVENLSSRCSWQDLKD-FMRQAGEVTYADAHKERTNE----GVIEFRSYSDMKRALDK 165

  Fly   118 MNRYEVNGRELVVKEDHGEQRDQYGRIVRDGGGGGGGGGGVQGGNGGNNGGGGGGGRDHMDDRDR 182
            ::..|:|||.:.:.||......:     |...|........:.....:........|.....|.|
Mouse   166 LDGTEINGRNIRLIEDKPRTSHR-----RSYSGSRSRSRSRRRSRSRSRRSSRSRSRSISKSRSR 225

  Fly   183 GFSR---RDDDRLSGRNNFNMM---------SNDYNNSSNYNLYGLSAS 219
            ..||   |...|..||.:.:..         |:.::.|.:.:.||.|.|
Mouse   226 SRSRSKGRSRSRSKGRKSRSKSKSKPKSDRGSHSHSRSRSKDKYGKSRS 274

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rump	NP_649899.1	PABP-1234	48..435	CDD:130689	44/191 (23%)
		RRM1_hnRNPM_like	58..133	CDD:409819	22/74 (30%)
		RRM2_hnRNPM_like	234..307	CDD:409820
		RRM_SF	565..629	CDD:473069
Srsf6	NP_080775.3	RRM_SF	1..72	CDD:473069	7/26 (27%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	75..103		10/27 (37%)
		RRM2_SRSF6	110..182	CDD:410159	23/76 (30%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	176..339		19/104 (18%)