Sequence 1: | NP_649899.1 | Gene: | rump / 41138 | FlyBaseID: | FBgn0267790 | Length: | 632 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001013223.2 | Gene: | Myef2 / 679712 | RGDID: | 1306547 | Length: | 591 | Species: | Rattus norvegicus |
Alignment Length: | 668 | Identity: | 210/668 - (31%) |
---|---|---|---|
Similarity: | 306/668 - (45%) | Gaps: | 164/668 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MSMDASNSVESREKERDRRGRG-ARGSRFTDADGNGN-GAGSQGGGVAARDRSRERRNCRVYISN 63
Fly 64 IPYDYRWQDLKDLFRRIVGSIEYVQLFFDESGKARGCGIVEFKDPENVQKALEKMNRYEVNGREL 128
Fly 129 VVKED-HGE------QRDQYGRIVRDGGGGGGGGGGVQGGNGGNNGGGGGGGRDHMDDRDRGFSR 186
Fly 187 RDDDRLSGRNNFNMMSNDYNNSSNYNLYGLSASFLESLGISGPLHNKVFVANLDYKVDNKKLKQV 251
Fly 252 FKLAGKVQSVDLSLDKEGNSRGFAVIEYDHPVEAVQAISMLDRQMLFDRRMTVRLD--RIPDK-- 312
Fly 313 ----NEGIKLPEGLGGVGIGLGPNGEPLRDVAHNLPNGGQSQGQLLGNAQQGSQLGSVGSQPNSS 373
Fly 374 AVSNATTNLLNNLTGVMFGNHAAVQPSPVAPVQKPSLGN-NTGSGGLNLNNLNPSILAAVVGNLG 437
Fly 438 NQGGNLSNPLLSSSLSNLGLNLGNSGNDDNLPPSNVGLSNNYSSGGTGGGNSYSSGNNYSGGGGS 502
Fly 503 SNLGYNAYSSSGGMGG-----GNGGVGVD--GNDYNTGNP---------LDVYGGGSNVGNSNVG 551
Fly 552 SANAVGASRKSDTIIIKNVPITCTWQTLRDKFREIGDVKFAEI-----RGNDVGVVRFFKERDAE 611
Fly 612 LAIALMDGSRLDGRNIKV 629 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rump | NP_649899.1 | PABP-1234 | 48..435 | CDD:130689 | 138/402 (34%) |
RRM1_hnRNPM_like | 58..133 | CDD:240831 | 46/74 (62%) | ||
RRM2_hnRNPM_like | 234..307 | CDD:240832 | 39/72 (54%) | ||
RRM | <543..>631 | CDD:223796 | 32/92 (35%) | ||
RRM_SF | 565..630 | CDD:302621 | 28/70 (40%) | ||
Myef2 | NP_001013223.2 | RRM1_MYEF2 | 92..167 | CDD:410059 | 46/74 (62%) |
PABP-1234 | 115..>587 | CDD:130689 | 183/586 (31%) | ||
RRM2_MYEF2 | 224..299 | CDD:410061 | 39/74 (53%) | ||
RRM3_MYEF2 | 515..591 | CDD:410063 | 28/71 (39%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166348785 | |
Domainoid | 1 | 1.000 | 91 | 1.000 | Domainoid score | I7519 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 272 | 1.000 | Inparanoid score | I2917 |
OMA | 1 | 1.010 | - | - | QHG48675 | |
OrthoDB | 1 | 1.010 | - | - | D1174365at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0003017 | |
OrthoInspector | 1 | 1.000 | - | - | otm45214 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103495 | |
Panther | 1 | 1.100 | - | - | O | PTHR23003 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X1365 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
12 | 11.960 |