Sequence 1: | NP_649899.1 | Gene: | rump / 41138 | FlyBaseID: | FBgn0267790 | Length: | 632 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001016035.1 | Gene: | myef2 / 548789 | XenbaseID: | XB-GENE-854005 | Length: | 616 | Species: | Xenopus tropicalis |
Alignment Length: | 661 | Identity: | 213/661 - (32%) |
---|---|---|---|
Similarity: | 317/661 - (47%) | Gaps: | 122/661 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 DASNSVESREKERDRRGRGARGSRFTDADGNGNGAGSQGGGVAARDRSRERRNCRVYISNIPYDY 68
Fly 69 RWQDLKDLFRRIVGSIEYVQLFFDESGKARGCGIVEFKDPENVQKALEKMNRYEVNGRELVVKED 133
Fly 134 -HGEQRDQYGRIVRDGGGGGGGGGGVQGGNGGNNGGGGGGGRDHMDDRDRGFSRRDDDRLSGRNN 197
Fly 198 FNMMSNDYNNSSNYNLYGLSASFLESLGISGPLHNKVFVANLDYKVDNKKLKQVFKLAGKVQSVD 262
Fly 263 LSLDKEGNSRGFAVIEYDHPVEAVQAISMLDRQMLFDRRMTVRLDRIPDKN---------EGIKL 318
Fly 319 PEGLGGVGIGLGPNGEPLRDVAHNLPNGGQSQGQLLGNAQQGSQLGSVGSQPNSSAVSNATTNLL 383
Fly 384 NNLTGVMFGNHAAVQPSPVAPVQKPSLGNNTGSGGLN-------LNNLNPSILAAVVGNLGNQGG 441
Fly 442 NLSNPLLSSSLSNLGLNLGNSGNDDNLPPSNVGLSNNYSSGGTGGGNSYSSGNNYSGGGGSSNLG 506
Fly 507 YNAYSSSGGMGGGNG---GVGVD----------GNDYNTGNPLDVYGGGSNVGNSNVGSANAVGA 558
Fly 559 SRKSDTIIIKNVPITCTWQTLRDKFREIGDVKFAEI-----RGNDVGVVRFFKERDAELAIALMD 618
Fly 619 GSRLDGRNIKV 629 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rump | NP_649899.1 | PABP-1234 | 48..435 | CDD:130689 | 143/403 (35%) |
RRM1_hnRNPM_like | 58..133 | CDD:240831 | 43/74 (58%) | ||
RRM2_hnRNPM_like | 234..307 | CDD:240832 | 41/72 (57%) | ||
RRM | <543..>631 | CDD:223796 | 33/92 (36%) | ||
RRM_SF | 565..630 | CDD:302621 | 29/70 (41%) | ||
myef2 | NP_001016035.1 | RRM | 13..292 | CDD:223796 | 117/298 (39%) |
RRM_SF | 81..156 | CDD:302621 | 43/74 (58%) | ||
RRM2_hnRNPM_like | 224..297 | CDD:240832 | 41/72 (57%) | ||
Forkhead_N | <452..536 | CDD:254796 | 22/88 (25%) | ||
RRM3_MYEF2 | 540..616 | CDD:241106 | 29/71 (41%) | ||
RRM | <541..>616 | CDD:223796 | 29/70 (41%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 91 | 1.000 | Domainoid score | I7589 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 281 | 1.000 | Inparanoid score | I2829 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1174365at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0003017 | |
OrthoInspector | 1 | 1.000 | - | - | otm48281 | |
Panther | 1 | 1.100 | - | - | O | PTHR23003 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X1365 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 8.160 |