Protein Alignment rump and rbm34

DIOPT Version :10

• Sequence 1: NP_649899.1
• Gene: rump / 41138
• FlyBaseID: FBgn0267790
• Length: 632
• Species: Drosophila melanogaster
• Sequence 2: NP_001004890.1
• Gene: rbm34 / 448232
• XenbaseID: XB-GENE-5895036
• Length: 412
• Species: Xenopus tropicalis
• Alignment Length: 313
• Identity: 66/313 - (21%)
• Similarity: 114/313 - (36%)
• Gaps: 103/313 - (32%)

  Fly     4 DASNSVESREKERDRRGRGARGSRFTDADGNGNGAGSQGGGVAARDRSR------ER-RNCR-VY 60
            :...:|.|:||.:.::.:.      .|.|           ||..:.|.|      || :|.| |:
 Frog   124 ETRKNVISKEKLKSKKNQS------LDDD-----------GVVVQPRKRKVNRAEERIKNKRTVF 171

  Fly    61 ISNIPYDYRWQDLKDLFRRI--VGSIEYVQLFFDESGKARGCGIVEFKDPENVQKALEKMNRYEV 123
            :.|:|.||..|.||.||:..  :.|:.:..:...|:..:|....::.|    |....:.:|.|
 Frog   172 VGNLPADYTKQMLKSLFKEFGHIESMRFRSVARAEANLSRKVAAIQRK----VHPKRKNINAY-- 230

  Fly   124 NGRELVVKEDHGEQRDQYGRIVRDGGGGGGGGGGVQGGNGGNNGGGGGGGRDHMDDRDRGFSRRD 188
                 :|.:|.........|                  ||...|.              ||..|.
 Frog   231 -----IVFKDESSASQALKR------------------NGAEVGS--------------GFHIRV 258

  Fly   189 DDRLSGRNNFNMMSNDYNNSSNYNLYGLSASFLESLGISGPLHNKVFVANLDYKVDNKKLKQVFK 253
            |  ::.:.:    |:|...|:                         |:.||.|:::.:.::..|.
 Frog   259 D--IASKRS----SHDNKRSA-------------------------FIGNLPYEIEEEAVRDHFS 292

  Fly   254 LAGKVQSVDLSLD-KEGNSRGFAVIEYDHPVEAVQAISMLDRQMLFDRRMTVR 305
            ..||||.|.:..| |.|..:||..:.:: ..:|||....|:...|..|::.|:
 Frog   293 ECGKVQGVRIIRDQKTGIGKGFGYVLFE-SADAVQLALKLNNSELSGRKIRVK 344

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rump	NP_649899.1	PABP-1234	48..435	CDD:130689	58/269 (22%)
		RRM1_hnRNPM_like	58..133	CDD:409819	19/77 (25%)
		RRM2_hnRNPM_like	234..307	CDD:409820	22/73 (30%)
		RRM_SF	565..629	CDD:473069
rbm34	NP_001004890.1	RRM1_RBM34	168..259	CDD:409828	27/133 (20%)
		RRM2_RBM34	272..344	CDD:409829	22/97 (23%)