Sequence 1: | NP_649899.1 | Gene: | rump / 41138 | FlyBaseID: | FBgn0267790 | Length: | 632 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001262897.1 | Gene: | Rox8 / 42848 | FlyBaseID: | FBgn0005649 | Length: | 470 | Species: | Drosophila melanogaster |
Alignment Length: | 404 | Identity: | 74/404 - (18%) |
---|---|---|---|
Similarity: | 137/404 - (33%) | Gaps: | 116/404 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 231 HNKVFVANLDYKVDNKKLKQVFKLAGKVQSVDLSLDKEG-NSRGFAVIEYDHPVEAVQAISMLDR 294
Fly 295 QMLFDRRMTVRLD----RIPDKNEGIKLPEGLGGVGIGLGPNGEPLRDVAHNLPNGGQSQGQLLG 355
Fly 356 NAQQGSQLGSVGSQPNSSAVSNATT-------NLLN----NLTGVMFGNHAAVQPSPVAPVQKPS 409
Fly 410 LGNNTGSGGLNL-------NNLNPSILAAVVGNL-----GNQGGNLSNPLLSSSLSNLGLNLGNS 462
Fly 463 GNDDNLPPSNVGLSNNYSSGGTGGGNSYSSGNNYSGGGGSS--------------------NLGY 507
Fly 508 -----------------------NAYSSSGGMGGGNGGVGVDGNDYNTGNPLDVYG-GGSNVGNS 548
Fly 549 NVGSANAVGASRKS 562 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
rump | NP_649899.1 | PABP-1234 | 48..435 | CDD:130689 | 44/226 (19%) |
RRM1_hnRNPM_like | 58..133 | CDD:240831 | |||
RRM2_hnRNPM_like | 234..307 | CDD:240832 | 17/73 (23%) | ||
RRM | <543..>631 | CDD:223796 | 5/20 (25%) | ||
RRM_SF | 565..630 | CDD:302621 | |||
Rox8 | NP_001262897.1 | ELAV_HUD_SF | 5..274 | CDD:273741 | 43/215 (20%) |
RRM1_TIA1_like | 9..80 | CDD:240798 | |||
RRM2_TIA1_like | 96..170 | CDD:240799 | 17/75 (23%) | ||
RRM3_TIA1_like | 221..294 | CDD:240800 | 13/83 (16%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0724 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |