| Sequence 1: | NP_649899.1 | Gene: | rump / 41138 | FlyBaseID: | FBgn0267790 | Length: | 632 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_012814227.2 | Gene: | tia1 / 394890 | XenbaseID: | XB-GENE-1002876 | Length: | 389 | Species: | Xenopus tropicalis |
| Alignment Length: | 410 | Identity: | 77/410 - (18%) |
|---|---|---|---|
| Similarity: | 130/410 - (31%) | Gaps: | 117/410 - (28%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 59 VYISNIPYDYRWQDLKDLFRRIVGSIEYVQLFFDESGKARGCGIVEFKDPENVQKALEKMNRYEV 123
Fly 124 NGRELVV-----------------------KEDH-----GEQRDQ------------YGRI---- 144
Fly 145 -VRDGGGGGGGGGGV-------QGGNG-GNNGGGGGGGRDHMDDRDRGFSRRDDDRLSGRNNFNM 200
Fly 201 MSNDYNNSSNYNLYGLSASFLESLGISGPLHNKVFVANLDYKVDNKKLKQVFKLAGKVQSVDLSL 265
Fly 266 DKEGNSRGFAVIEYDHPVEAVQAISMLDRQML--------FDRRMTVRLDRIPDKNEG--IKLPE 320
Fly 321 GLGGVGIGLGPNGEPLRDVAHNLPNGGQSQGQLLGNAQQGSQLGSVG----SQPNSSAVSNATTN 381
Fly 382 LLNNLTGVMFGNHAAVQPSP 401 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rump | NP_649899.1 | PABP-1234 | 48..435 | CDD:130689 | 77/410 (19%) |
| RRM1_hnRNPM_like | 58..133 | CDD:240831 | 17/96 (18%) | ||
| RRM2_hnRNPM_like | 234..307 | CDD:240832 | 11/80 (14%) | ||
| RRM | <543..>631 | CDD:223796 | |||
| RRM_SF | 565..630 | CDD:302621 | |||
| tia1 | XP_012814227.2 | RRM1_TIA1 | 8..81 | CDD:410027 | 17/73 (23%) |
| RRM2_TIA1 | 104..181 | CDD:410030 | 18/79 (23%) | ||
| RRM3_TIAR | 214..286 | CDD:241064 | 11/76 (14%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||