DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment rump and tial1

DIOPT Version :9

Sequence 1:	NP_649899.1	Gene:	rump / 41138	FlyBaseID:	FBgn0267790	Length:	632	Species:	Drosophila melanogaster
Sequence 2:	XP_005156854.1	Gene:	tial1 / 394107	ZFINID:	ZDB-GENE-040426-1547	Length:	399	Species:	Danio rerio

Alignment Length:	92	Identity:	21/92 - (22%)
Similarity:	38/92 - (41%)	Gaps:	24/92 - (26%)

- Green bases have known domain annotations that are detailed below.

  Fly   564 TIIIKNVPITCTWQTLRDKFREIGDVKFA-----------EIRGNDVG-------------VVRF 604
            |:.:.|:....|...:...|.:||..|..           ::..:.:|             .|.|
Zfish     9 TLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEQSDSSRKMNSSSIGFSVLQHTSNDPYCFVEF 73

  Fly   605 FKERDAELAIALMDGSRLDGRNIKVTY 631
            |:.|||..|:|.|:|.::.|:.:||.:
Zfish    74 FEHRDAAAALAAMNGRKILGKEVKVNW 100

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
rump	NP_649899.1	PABP-1234	48..435	CDD:130689
		RRM1_hnRNPM_like	58..133	CDD:240831
		RRM2_hnRNPM_like	234..307	CDD:240832
		RRM	<543..>631	CDD:223796	21/90 (23%)
		RRM_SF	565..630	CDD:302621	19/88 (22%)
tial1	XP_005156854.1	RRM	7..295	CDD:223796	21/92 (23%)
		RRM_SF	9..108	CDD:302621	21/92 (23%)
		RRM2_TIAR	114..203	CDD:241061
		RRM3_TIAR	233..305	CDD:241064
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0724
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.900