| Sequence 1: | NP_649899.1 | Gene: | rump / 41138 | FlyBaseID: | FBgn0267790 | Length: | 632 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_056050.1 | Gene: | CSTF2T / 23283 | HGNCID: | 17086 | Length: | 616 | Species: | Homo sapiens |
| Alignment Length: | 630 | Identity: | 134/630 - (21%) |
|---|---|---|---|
| Similarity: | 209/630 - (33%) | Gaps: | 185/630 - (29%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 45 VAARDRSRERRNCRVYISNIPYDYRWQDLKDLFRRIVGSIEYVQLFFD-ESGKARGCGIVEFKDP 108
Fly 109 ENVQKALEKMNRYEVNGRELVV----KEDHGEQRDQYGRI--VRDGGGGGGGGGGVQGGNGGNNG 167
Fly 168 GGGGGGRDHMDDRDRGFS-RRDDDRLSGRNNFNMM-------SNDYNNSSNYNLYG--LSASFLE 222
Fly 223 S---LGISGP------LHNKVFVANLDYKVDNKKLKQVFKLAGKVQSVDLSLDKEGNSRGFA--- 275
Fly 276 ---VIEYDHPVEAVQAISMLDRQMLFDRRMTVRLD-------------RIPDKNEGIKLPEG--- 321
Fly 322 --LGGVGIG----------------------LGPNGEPLRDVAHNLPNGGQSQGQLL---GNAQQ 359
Fly 360 GSQLGSVGSQPNSSAVSNATTN--LLNNLTGVMFGNHAAVQPSPVAP-VQKPSLGNNTGSGG--- 418
Fly 419 --LNLNNLNPSILAAVV------------------GNLGNQGGNLSNPLLSSSLSNLG------- 456
Fly 457 LNLGNSGNDDNLPPSN----VGLSNNYSSGGTGGGNSYSSGNNYSGGGGSSNLGYNAYSSSGGMG 517
Fly 518 GGNGGVGVDGNDYNTGNPLDVYGGGSNVGNSNVGSANAVGASRKS 562 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rump | NP_649899.1 | PABP-1234 | 48..435 | CDD:130689 | 102/487 (21%) |
| RRM1_hnRNPM_like | 58..133 | CDD:240831 | 29/79 (37%) | ||
| RRM2_hnRNPM_like | 234..307 | CDD:240832 | 14/78 (18%) | ||
| RRM | <543..>631 | CDD:223796 | 4/20 (20%) | ||
| RRM_SF | 565..630 | CDD:302621 | |||
| CSTF2T | NP_056050.1 | RRM | <16..>109 | CDD:223796 | 32/93 (34%) |
| RRM_CSTF2_CSTF2T | 18..92 | CDD:241115 | 29/74 (39%) | ||
| CSTF2_hinge | 113..191 | CDD:291025 | 16/100 (16%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 203..241 | 9/37 (24%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 262..418 | 31/157 (20%) | |||
| 9 X 5 AA tandem repeats of M-E-T-R-[AG] | 418..462 | 3/43 (7%) | |||
| 9 X 5 AA tandem repeats of G-[AT]-G-[MI]-Q | 505..549 | 13/62 (21%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 542..573 | 5/21 (24%) | |||
| CSTF_C | 572..612 | CDD:291002 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG0724 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.810 | |||||