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Protein Alignment rump and rnp-9
DIOPT Version :9
Sequence 1: | NP_649899.1 |
Gene: | rump / 41138 |
FlyBaseID: | FBgn0267790 |
Length: | 632 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001359585.1 |
Gene: | rnp-9 / 182350 |
WormBaseID: | WBGene00007396 |
Length: | 312 |
Species: | Caenorhabditis elegans |
Alignment Length: | 182 |
Identity: | 45/182 - (24%) |
Similarity: | 65/182 - (35%) |
Gaps: | 54/182 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MSMDASN-----------SVESREKERDRRGRGARGSRFTDADGNGNG----AGSQGGGV----- 45
:|.|.|| .|...:..||.:.:.::|..|.......|. ||..|..:
Worm 94 LSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGMNGKWIGKRAV 158
Fly 46 ----AARDRSRERR---------------NCRVYISNIPYDYRWQDLKDLFRRIVGSIEYVQLFF 91
|||..|.|.| |..||:.||.......||:||| ...|.|..|::|
Worm 159 RTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLRDLF-STYGDIAEVRIF- 221
Fly 92 DESGKARGCGIVEFKDPENVQKALEKMNRYEVNGRELVVKEDHGEQRDQYGR 143
|.:....|.::..|...||:.:||..|:.|.:: |..:||
Worm 222 ----KTQRYAFVRYEKKECATKAIMEMNGKEMAGNQV---------RCSWGR 260
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG0724 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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