| Sequence 1: | NP_649899.1 | Gene: | rump / 41138 | FlyBaseID: | FBgn0267790 | Length: | 632 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_496442.1 | Gene: | rsp-1 / 174748 | WormBaseID: | WBGene00004698 | Length: | 312 | Species: | Caenorhabditis elegans |
| Alignment Length: | 260 | Identity: | 68/260 - (26%) |
|---|---|---|---|
| Similarity: | 101/260 - (38%) | Gaps: | 61/260 - (23%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 58 RVYISNIPYDYRWQDLKDLFRRIVGSIEYVQLFFDESGKARGCGIVEFKDPENVQKALEKMNRYE 122
Fly 123 VNGRELVVKEDHGEQRDQYGRIVRDGGG--GGGGGGGVQGGNGGNNGGGGGGGRDHMDDRDRGFS 185
Fly 186 RRDDDRLSGRNNFNMMSNDYNNSSNYNLYGLSASFLESLGISGPLHNKVFVANLDYKVDNKKLKQ 250
Fly 251 VFKLAGKVQSVDLSLDKEGNSRGFAVIEYDHPVEAVQAISMLDRQMLFDRRMTVRLDRIPDKNEG 315
Fly 316 315 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rump | NP_649899.1 | PABP-1234 | 48..435 | CDD:130689 | 68/260 (26%) |
| RRM1_hnRNPM_like | 58..133 | CDD:240831 | 20/74 (27%) | ||
| RRM2_hnRNPM_like | 234..307 | CDD:240832 | 16/72 (22%) | ||
| RRM | <543..>631 | CDD:223796 | |||
| RRM_SF | 565..630 | CDD:302621 | |||
| rsp-1 | NP_496442.1 | RRM | <3..180 | CDD:223796 | 61/230 (27%) |
| RRM1_SRSF4_like | 4..73 | CDD:240783 | 21/78 (27%) | ||
| RRM2_SRSF4_like | 129..200 | CDD:241044 | 17/78 (22%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||