Protein Alignment rump and Rsf1

DIOPT Version :10

• Sequence 1: NP_649899.1
• Gene: rump / 41138
• FlyBaseID: FBgn0267790
• Length: 632
• Species: Drosophila melanogaster
• Sequence 2: XP_061509636.1
• Gene: Rsf1 / 1280099
• VectorBaseID: AGAMI1_014631
• Length: 224
• Species: Anopheles gambiae
• Alignment Length: 343
• Identity: 80/343 - (23%)
• Similarity: 110/343 - (32%)
• Gaps: 149/343 - (43%)

  Fly   233 KVFVANLDYKVDNKKLKQVFKLAGKVQSVDLSLDKEGNSRGFAVIEYDHPVEAVQAISMLDRQML 297
            :|:|.||..||..:.|:..|...||:.||.::.    |..|||.||:::..||..|...|:.|.:
Mosquito     8 RVYVGNLTDKVKKEDLEGEFTKYGKLNSVWVAF----NPPGFAFIEFENKEEAETACDNLNGQDI 68

  Fly   298 FDRRMTVRLDRIPDKNEGIKLPEGLGGVGIGLGPNGEPLRDVAHNLPNGGQSQGQLLGNAQQGSQ 362
            ...::.|.:      ::|.:.|.     |...|..|.|
Mosquito    69 LGSKLRVEI------SKGRRNPR-----GASRGFRGPP--------------------------- 95

  Fly   363 LGSVGSQPNSSAVSNATTNLLNNLTGVMFGNHAAVQPSPVAPVQKPSLGNNTGSGGLNLNNLNPS 427
                                                            |.|.||||
Mosquito    96 ------------------------------------------------GRNGGSGG--------- 103

  Fly   428 ILAAVVGNLGNQGGNLSNPLLSSSLSNLGLNLGNSGNDDNLPPSNVGLSNNYSSGGTGGGNS--- 489
                  |::|..||       .||..|     |:.|...:      |..::|.||.:|||.|
Mosquito   104 ------GSIGGSGG-------GSSFRN-----GSRGGFRD------GGGSSYRSGSSGGGGSSFR 144

  Fly   490 --------YSSGNNYSGGGGSSNLGYN-------AYSSSGGMGGGNGGVGVDGNDYNTGNPLDVY 539
                    :..|...|||||..:.||:       .|.||||..||.||.|  |...:.|
Mosquito   145 GGSRSSGRFDGGYGSSGGGGGRSSGYSRDGGRDGGYGSSGGSFGGGGGYG--GGRSSGG------ 201

  Fly   540 GGGSNVGNSNVGSANAVG 557
            |||...|.....|.:.||
Mosquito   202 GGGGGGGGGRFRSRSPVG 219

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rump	NP_649899.1	PABP-1234	48..435	CDD:130689	36/201 (18%)
		RRM1_hnRNPM_like	58..133	CDD:409819
		RRM2_hnRNPM_like	234..307	CDD:409820	24/72 (33%)
		RRM_SF	565..629	CDD:473069
Rsf1	XP_061509636.1	None