| Sequence 1: | NP_649899.1 | Gene: | rump / 41138 | FlyBaseID: | FBgn0267790 | Length: | 632 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001103381.1 | Gene: | Hnrnpm / 116655 | RGDID: | 620369 | Length: | 729 | Species: | Rattus norvegicus |
| Alignment Length: | 760 | Identity: | 210/760 - (27%) |
|---|---|---|---|
| Similarity: | 312/760 - (41%) | Gaps: | 222/760 - (29%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 10 ESREKERDRRGRGARGSRFTDADGNGNGAGSQGGGVAARDRSRERRNCRVYISNIPYDYRWQDLK 74
Fly 75 DLFRRIVGSIEYVQLFFDESGKARGCGIVEFKDPENVQKALEKMNRYEVNGRELVVKED-HGEQ- 137
Fly 138 RDQYGRIVRDGGGGGGGGGGVQGGNGGNNGGGGGGGRDHMDDRDRGFSRRDDDRLSGRNNF--NM 200
Fly 201 MSNDYNNSSNYNLYGLSASFLESLGISGPLHNKVFVANLDYKVDNKKLKQVFKLAGKVQSVDLSL 265
Fly 266 DKEGNSRGFAVIEYDHPVEAVQAISMLDRQMLFDRRMTVRLDR---------IPDKNEGIKLPEG 321
Fly 322 LGGVGIGLGPNGEPLRDVAHNLPNGGQSQGQLLGNAQQGSQ----------------------LG 364
Fly 365 SVGSQPNSSAVSNATTNLLNNLTGVMF---GNHAAVQPSPVAPVQKPSLGNNTGSG--------G 418
Fly 419 LNLNNLNPSI--LAAVVGNLGN-----QGGNLSNPL----LSSSLSNLGLNLGNSGND------- 465
Fly 466 ----------------------------------------DNLPPSNVG--------LSNNYSSG 482
Fly 483 --GTGGGNSYSSGNNYSGGG-----GSSNLGYNAYSSSG-------GMG--------GGNGGVGV 525
Fly 526 D-GNDYNTGNPLDVYGGGSNVGNSNVGSANAVGASRKSDTIIIKNVPITCTWQTLRDKFREIGDV 589
Fly 590 KFAEI-----RGNDVGVVRFFKERDAELAIALMDGSRLDGRNIKV 629 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| rump | NP_649899.1 | PABP-1234 | 48..435 | CDD:130689 | 138/434 (32%) |
| RRM1_hnRNPM_like | 58..133 | CDD:240831 | 37/74 (50%) | ||
| RRM2_hnRNPM_like | 234..307 | CDD:240832 | 41/72 (57%) | ||
| RRM | <543..>631 | CDD:223796 | 34/92 (37%) | ||
| RRM_SF | 565..630 | CDD:302621 | 28/70 (40%) | ||
| Hnrnpm | NP_001103381.1 | HnRNP_M | 40..69 | CDD:402915 | 7/45 (16%) |
| RRM1_hnRNPM | 71..146 | CDD:410058 | 37/74 (50%) | ||
| RRM2_hnRNPM | 203..278 | CDD:410060 | 41/74 (55%) | ||
| antiphage_ZorA_3 | <413..552 | CDD:411477 | 15/138 (11%) | ||
| RRM3_hnRNPM | 653..729 | CDD:410062 | 28/71 (39%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C166348782 | |
| Domainoid | 1 | 1.000 | 91 | 1.000 | Domainoid score | I7519 |
| eggNOG | 1 | 0.900 | - | - | E1_COG0724 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 272 | 1.000 | Inparanoid score | I2917 |
| OMA | 1 | 1.010 | - | - | QHG48675 | |
| OrthoDB | 1 | 1.010 | - | - | D1174365at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0003017 | |
| OrthoInspector | 1 | 1.000 | - | - | otm45214 | |
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | LDO | PTHR23003 |
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 1 | 1.000 | - | - | X1365 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 12 | 11.960 | |||||