DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RhoL and RHO1

DIOPT Version :10

Sequence 1:NP_001247003.1 Gene:RhoL / 41136 FlyBaseID:FBgn0014380 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_015491.1 Gene:RHO1 / 856294 SGDID:S000006369 Length:209 Species:Saccharomyces cerevisiae


Alignment Length:198 Identity:90/198 - (45%)
Similarity:122/198 - (61%) Gaps:20/198 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KITIVGDGMVGKTCMLITYTRNEFPEEYIPTVFDNHACNIAVDDRDYNLTLWDTAGQEDYERLRP 101
            |:.|||||..||||:||.:::.:|||.|:||||:|:..::.||.|...|.||||||||||:||||
Yeast    12 KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYDRLRP 76

  Fly   102 LSYPSTNCFLLCYSISSRTSFENVKSKWWPEIRHFSAHVPVVLVGTKLDLR---------IPNSE 157
            ||||.:|..|:|:||....|.|||:.||..|:.||...||::|||.|:|||         ....:
Yeast    77 LSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQ 141

  Fly   158 KFVTTQEGKKMRKEIHAFNLVECSAKKKQNLQQVFEEAVRAV---------ERKPKTT--SKQSC 211
            :.||:|||:.:..:|.|....|||||....:::|||.|.||.         :.|..||  .|:.|
Yeast   142 QPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASLMGKSKTNGKAKKNTTEKKKKKC 206

  Fly   212 KIL 214
            .:|
Yeast   207 VLL 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoLNP_001247003.1 Rho 36..198 CDD:206641 82/169 (49%)
RHO1NP_015491.1 RhoA_like 10..184 CDD:206662 84/171 (49%)

Return to query results.
Submit another query.