DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoL and rhobtb2a

DIOPT Version :10

Sequence 1:NP_001247003.1 Gene:RhoL / 41136 FlyBaseID:FBgn0014380 Length:214 Species:Drosophila melanogaster
Sequence 2:XP_073767321.1 Gene:rhobtb2a / 792631 ZFINID:ZDB-GENE-081105-67 Length:728 Species:Danio rerio


Alignment Length:228 Identity:63/228 - (27%)
Similarity:110/228 - (48%) Gaps:50/228 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KHTFLLNKDERGKKPGMTANITKSPRPLKITIVGDGMVGKTCML------ITYTRNEFPEEYIPT 67
            :|.| ::.|...::|.:        ..:|..:|||..||||.::      .|.|:.:....::||
Zfish    21 RHRF-MDSDMDYERPNV--------ETIKCVVVGDNAVGKTRLICARACNATLTQYQLLATHVPT 76

  Fly    68 VF--DNH-----AC---------NIAVDDRDYNLTLWDTAGQEDYERLRPLSYPSTNCFLLCYSI 116
            |:  |.:     .|         ...|||...:|.||||.|  |:.:.|..:|..::..:||:||
Zfish    77 VWAIDQYRVCQEVCLSGQVLERSRDVVDDVSVSLRLWDTFG--DHHKDRRFAYGRSDVVVLCFSI 139

  Fly   117 SSRTSFENVKSKWWPEIRHFSAHVPVVLVGTKLDLRIPN----------------SEKFVTTQEG 165
            ::..|..:|::.|:|||:||....||:|||.:||||..:                |.:.:..::|
Zfish   140 ANPNSLHHVRTMWYPEIKHFCPRAPVILVGCQLDLRYADLEAVNRARRPLARPIKSNEILAPEKG 204

  Fly   166 KKMRKEIHAFNLVECSAKKKQNLQQVFEEAVRA 198
            :::.||: .....|.|...:..::.||:.|:||
Zfish   205 REVAKEL-GVPYYETSIVAQFGVKDVFDNAIRA 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoLNP_001247003.1 Rho 36..198 CDD:206641 57/199 (29%)
rhobtb2aXP_073767321.1 None

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