DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoL and Rhoh

DIOPT Version :10

Sequence 1:NP_001247003.1 Gene:RhoL / 41136 FlyBaseID:FBgn0014380 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_001074574.1 Gene:Rhoh / 74734 MGIID:1921984 Length:191 Species:Mus musculus


Alignment Length:186 Identity:72/186 - (38%)
Similarity:107/186 - (57%) Gaps:8/186 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LKITIVGDGMVGKTCMLITYTRNEFPEEYIPTVFDNHACNIAVDDRDYNLTLWDTAGQEDYERLR 100
            :|..:|||..||||.:|:.:|...|||.|.|||::|...::.:|....:|.||||||.:.:..:|
Mouse     5 IKCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVFMDGIQISLGLWDTAGNDAFRSIR 69

  Fly   101 PLSYPSTNCFLLCYSISSRTSFENVKSKWWPEIRHFSAHVPVVLVGTKLDLRI--PNSEKFVTTQ 163
            ||||...:..|:|||:::..||.|:|:||..|||......||::|.|:.|.|.  |:....:...
Mouse    70 PLSYQQADVVLMCYSVANHNSFLNLKNKWISEIRSNLPCTPVLVVATQTDQREVGPHRASCINAI 134

  Fly   164 EGKKMRKEIHAFNLVECSAKKKQNLQQVFEEAVRAV------ERKPKTTSKQSCKI 213
            |||::.:::.|...:||||...:.:|||||.|||..      ..:.|..|...|||
Mouse   135 EGKRLAQDVRAKGYLECSALSNRGVQQVFECAVRTAVNQARRRNRRKLFSINECKI 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoLNP_001247003.1 Rho 36..198 CDD:206641 66/163 (40%)
RhohNP_001074574.1 Rho 5..169 CDD:206641 66/163 (40%)
Effector region. /evidence=ECO:0000250 33..41 4/7 (57%)
Interaction with ZAP70. /evidence=ECO:0000269|PubMed:17028588 73..86 5/12 (42%)

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