DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoL and Mtl

DIOPT Version :9

Sequence 1:NP_001247003.1 Gene:RhoL / 41136 FlyBaseID:FBgn0014380 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_524533.1 Gene:Mtl / 43319 FlyBaseID:FBgn0039532 Length:195 Species:Drosophila melanogaster


Alignment Length:191 Identity:100/191 - (52%)
Similarity:136/191 - (71%) Gaps:10/191 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 RPLKITIVGDGMVGKTCMLITYTRNEFPEEYIPTVFDNHACNIAVDDRDYNLTLWDTAGQEDYER 98
            ||:|..:||||.||||||||:||.:.||.||:||||||::..:.||....:|.||||||||||:|
  Fly     5 RPIKCVVVGDGTVGKTCMLISYTTDCFPGEYVPTVFDNYSAPMQVDTIQVSLGLWDTAGQEDYDR 69

  Fly    99 LRPLSYPSTNCFLLCYSISSRTSFENVKSKWWPEIRHFSAHVPVVLVGTKLDLRIPN------SE 157
            |||||||.|:.||:|||::|.:|||||.|||:|||:|.....|::|||||:|||...      :|
  Fly    70 LRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHCPDAPIILVGTKIDLREDRETLSGLAE 134

  Fly   158 KFVT---TQEGKKMRKEIHAFNLVECSAKKKQNLQQVFEEAVRAVER-KPKTTSKQSCKIL 214
            :.:|   .::|:|:..:|.|...:||||..::.|:.|||||||||.| :|....::.|.|:
  Fly   135 QGLTPLKREQGQKLANKIRAVKYMECSALTQRGLKPVFEEAVRAVLRPEPLKRRQRKCLIM 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoLNP_001247003.1 Rho 36..198 CDD:206641 91/170 (54%)
RHO 38..202 CDD:197554 94/173 (54%)
MtlNP_524533.1 RHO 9..182 CDD:197554 93/172 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0393
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D118389at33392
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24072
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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