DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoL and RND3

DIOPT Version :10

Sequence 1:NP_001247003.1 Gene:RhoL / 41136 FlyBaseID:FBgn0014380 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_005159.1 Gene:RND3 / 390 HGNCID:671 Length:244 Species:Homo sapiens


Alignment Length:184 Identity:66/184 - (35%)
Similarity:104/184 - (56%) Gaps:10/184 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KITIVGDGMVGKTCMLITYTRNEFPEEYIPTVFDNHACNIAVDDRDYNLTLWDTAGQEDYERLRP 101
            ||.:|||...|||.:|..:.::.|||.|:||||:|:..:..:|.:...|:||||:|...|:.:||
Human    25 KIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYYDNVRP 89

  Fly   102 LSYPSTNCFLLCYSISSRTSFENVKSKWWPEIRHFSAHVPVVLVGTKLDLRIPNS---------E 157
            ||||.::..|:|:.||...:.::|..||..||:.|..:..::|||.|.|||...|         :
Human    90 LSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQ 154

  Fly   158 KFVTTQEGKKMRKEIHAFNLVECSAKKKQN-LQQVFEEAVRAVERKPKTTSKQS 210
            ..|:..:|..|.|:|.|...:||||.:.:| ::.:|..|..|...|.....|::
Human   155 TPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVNKTNKNVKRN 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoLNP_001247003.1 Rho 36..198 CDD:206641 63/170 (37%)
RND3NP_005159.1 Rnd3_RhoE_Rho8 19..200 CDD:206735 64/174 (37%)
Effector region. /evidence=ECO:0000255 52..60 5/7 (71%)

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