DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoL and Rac1

DIOPT Version :10

Sequence 1:NP_001247003.1 Gene:RhoL / 41136 FlyBaseID:FBgn0014380 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_599193.1 Gene:Rac1 / 363875 RGDID:619755 Length:192 Species:Rattus norvegicus


Alignment Length:189 Identity:101/189 - (53%)
Similarity:131/189 - (69%) Gaps:10/189 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LKITIVGDGMVGKTCMLITYTRNEFPEEYIPTVFDNHACNIAVDDRDYNLTLWDTAGQEDYERLR 100
            :|..:||||.|||||:||:||.|.||.|||||||||::.|:.||.:..||.||||||||||:|||
  Rat     4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDYDRLR 68

  Fly   101 PLSYPSTNCFLLCYSISSRTSFENVKSKWWPEIRHFSAHVPVVLVGTKLDLRIPNS--EKF---- 159
            |||||.|:.||:|:|:.|..|||||::||:||:||...:.|::|||||||||....  ||.    
  Rat    69 PLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKK 133

  Fly   160 ---VTTQEGKKMRKEIHAFNLVECSAKKKQNLQQVFEEAVRAVERKPKTTS-KQSCKIL 214
               :|..:|..|.|||.|...:||||..::.|:.||:||:|||...|.... |:.|.:|
  Rat   134 LTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPPPVKKRKRKCLLL 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoLNP_001247003.1 Rho 36..198 CDD:206641 94/170 (55%)
Rac1NP_599193.1 Rac1_like 3..176 CDD:206663 95/171 (56%)
Effector region. /evidence=ECO:0000255 32..40 7/7 (100%)
Polybasic region, required for nuclear import. /evidence=ECO:0000250|UniProtKB:P63000 179..188 2/8 (25%)

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