Protein Alignment RhoL and Rnd1

DIOPT Version :9

• Sequence 1: NP_001247003.1
• Gene: RhoL / 41136
• FlyBaseID: FBgn0014380
• Length: 214
• Species: Drosophila melanogaster
• Sequence 2: NP_766200.1
• Gene: Rnd1 / 223881
• MGIID: 2444878
• Length: 232
• Species: Mus musculus
• Alignment Length: 228
• Identity: 64/228 - (28%)
• Similarity: 112/228 - (49%)
• Gaps: 44/228 - (19%)

  Fly    31 KSPRPL----KITIVGDGMVGKTCMLITYTRNEFPEEYIPTVFDNHACNIAVDDRDYNLTLWDTA 91
            ::|:|:    |:.:|||...|||.||....::.:||.|:||||:|:...:..:::...|:||||:
Mouse     5 RAPQPVVVRCKLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTACLETEEQRVELSLWDTS 69

  Fly    92 GQEDYERLRPLSYPSTNCFLLCYSISSRTSFENVKSKWWPEIRHFSAHVPVVLVGTKLDLRIPNS 156
            |...|:.:|||.|..::..|||:.||...:.::...||..||..:.....|:|:|.|.|||...|
Mouse    70 GSPYYDNVRPLCYSDSDAVLLCFDISRPETMDSALKKWRTEILDYCPSTRVLLIGCKTDLRTDLS 134

  Fly   157 ---------EKFVTTQEGKKMRKEIHAFNLVECSA-KKKQNLQQVFEEA---------------- 195
                     :..::.::|..:.|::.|...:|.|| ..:.::..:|..|
Mouse   135 TLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGSAFTSETSIHSIFRTASMVCLNKSSPVPPKSP 199

  Fly   196 VRAVERK----P------KTTSK----QSCKIL 214
            ||::.::    |      .||.|    :||.|:
Mouse   200 VRSLSKRLLHLPSRSELISTTFKKEKAKSCSIM 232

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RhoL	NP_001247003.1	Rho	36..198	CDD:206641	54/191 (28%)
		RHO	38..202	CDD:197554	54/189 (29%)
Rnd1	NP_766200.1	P-loop_NTPase	1..232	CDD:304359	63/226 (28%)
		RHO	16..190	CDD:197554	52/173 (30%)
		Effector region. /evidence=ECO:0000255	42..50		5/7 (71%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0393
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900