DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoL and mig-2

DIOPT Version :10

Sequence 1:NP_001247003.1 Gene:RhoL / 41136 FlyBaseID:FBgn0014380 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_509931.1 Gene:mig-2 / 181344 WormBaseID:WBGene00003239 Length:195 Species:Caenorhabditis elegans


Alignment Length:194 Identity:99/194 - (51%)
Similarity:130/194 - (67%) Gaps:12/194 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 SP-RPLKITIVGDGMVGKTCMLITYTRNEFPEEYIPTVFDNHACNIAVDDRDYNLTLWDTAGQED 95
            || |.:|..:||||.||||||||:||.:.||.:|:||||||::..:::|....||.|||||||||
 Worm     3 SPSRQIKCVVVGDGTVGKTCMLISYTTDSFPVQYVPTVFDNYSAQMSLDGNVVNLGLWDTAGQED 67

  Fly    96 YERLRPLSYPSTNCFLLCYSISSRTSFENVKSKWWPEIRHFSAHVPVVLVGTKLDLRIPNSEKF- 159
            |:||||||||.|:.|:||:|:.|..||:||.|||.||||......||:||||||||| ..:|.. 
 Worm    68 YDRLRPLSYPQTDVFILCFSVVSPVSFDNVASKWIPEIRQHCPDAPVILVGTKLDLR-DEAEPMR 131

  Fly   160 ---------VTTQEGKKMRKEIHAFNLVECSAKKKQNLQQVFEEAVRAVERKPKTTSKQSCKIL 214
                     ::..:|.||.::|.|...:||||..:|.|.||||:|||::........|:||.|:
 Worm   132 ALQAEGKSPISKTQGMKMAQKIKAVKYLECSALTQQGLTQVFEDAVRSILHPKPQKKKKSCNIM 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoLNP_001247003.1 Rho 36..198 CDD:206641 91/171 (53%)
mig-2NP_509931.1 RHO 10..183 CDD:197554 91/173 (53%)

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