DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoL and crp-1

DIOPT Version :10

Sequence 1:NP_001247003.1 Gene:RhoL / 41136 FlyBaseID:FBgn0014380 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_505688.1 Gene:crp-1 / 179462 WormBaseID:WBGene00012532 Length:187 Species:Caenorhabditis elegans


Alignment Length:183 Identity:74/183 - (40%)
Similarity:113/183 - (61%) Gaps:4/183 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LKITIVGDGMVGKTCMLITYTRNEFPEEYIPTVFDNHACNIAVDDRDYNLTLWDTAGQEDYERLR 100
            ||:.:|||...|||.:|:.||:.:|.:.|..|||||.|.::.:|:::|.:.|:|||||.:||::|
 Worm     5 LKLVVVGDTYTGKTSLLVAYTKKQFLDNYTTTVFDNWAVSVHIDNKNYAVNLFDTAGQGNYEQIR 69

  Fly   101 PLSYPSTNCFLLCYSISSRTSFENVKSKWWPEIRHFSA-HVPVVLVGTKLDL-RIPNSEKFVTTQ 163
            .||||..|.||:|:|:..|.:.|:.:|.|.||||.::. :||::|||||.|| ...:|...||..
 Worm    70 CLSYPHANVFLVCFSMIDRKTLESCRSTWIPEIRKYAGDNVPIMLVGTKNDLVDDADSRNTVTED 134

  Fly   164 EGKKMRKEIHAFNLVECSAKKKQNLQQVFEEAVRAV--ERKPKTTSKQSCKIL 214
            ..|::..||.......|||...:.|::||:|:..|.  .:..:.|....|.||
 Worm   135 YAKRVAHEIGCHKFYSCSALTHKGLKRVFDESFLAAVGVKLEEETPNPCCTIL 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoLNP_001247003.1 Rho 36..198 CDD:206641 69/163 (42%)
crp-1NP_505688.1 Rho 5..169 CDD:206641 69/163 (42%)

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