Protein Alignment RhoL and rho-1

DIOPT Version :9

• Sequence 1: NP_001247003.1
• Gene: RhoL / 41136
• FlyBaseID: FBgn0014380
• Length: 214
• Species: Drosophila melanogaster
• Sequence 2: NP_502959.1
• Gene: rho-1 / 178458
• WormBaseID: WBGene00004357
• Length: 192
• Species: Caenorhabditis elegans
• Alignment Length: 188
• Identity: 91/188 - (48%)
• Similarity: 131/188 - (69%)
• Gaps: 12/188 - (6%)

  Fly    37 KITIVGDGMVGKTCMLITYTRNEFPEEYIPTVFDNHACNIAVDDRDYNLTLWDTAGQEDYERLRP 101
            |:.|||||..||||:||.:::::||:.|:||||:|:..:|.||.:...|.||||||||||:||||
 Worm     7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRP 71

  Fly   102 LSYPSTNCFLLCYSISSRTSFENVKSKWWPEIRHFSAHVPVVLVGTKLDLRI-PNS--------E 157
            ||||.|:..|:|:||.|..|.||:..||.||:|||..:||::|||.|.|||. |.:        :
 Worm    72 LSYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCPNVPIILVGNKRDLRSDPQTVRELAKMKQ 136

  Fly   158 KFVTTQEGKKMRKEIHAFNLVECSAKKKQNLQQVFEEAVR-AVERKPKTTSKQSCKIL 214
            :.|..::|:.:.::|.||..:|||||.|..:::|||:|.: |:::|.|..||  |.||
 Worm   137 EPVKPEQGRAIAEQIGAFAYLECSAKTKDGIREVFEKATQAALQQKKKKKSK--CMIL 192

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RhoL	NP_001247003.1	Rho	36..198	CDD:206641	83/170 (49%)
		RHO	38..202	CDD:197554	83/173 (48%)
rho-1	NP_502959.1	RhoA_like	5..179	CDD:206662	83/171 (49%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0393
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1166960at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820