DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RhoL and RhoBTB

DIOPT Version :10

Sequence 1:NP_001247003.1 Gene:RhoL / 41136 FlyBaseID:FBgn0014380 Length:214 Species:Drosophila melanogaster
Sequence 2:XP_061508134.1 Gene:RhoBTB / 1277081 VectorBaseID:AGAMI1_009525 Length:761 Species:Anopheles gambiae


Alignment Length:199 Identity:58/199 - (29%)
Similarity:87/199 - (43%) Gaps:39/199 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LKITIVGDGMVGKTCMLITYTRN------EFPEEYIPTVFDNHACNI----------AVDDRDYN 84
            :|..:|||..||||.::.....|      :....::|||:......|          .||..:.:
Mosquito    11 VKCVLVGDTAVGKTRLICARACNKHVSLSQLLNTHVPTVWAIDQYRIYKDVLERSWEIVDGVNVS 75

  Fly    85 LTLWDTAGQEDYERLRPLSYPSTNCFLLCYSISSRTSFENVKSKWWPEIRHFSAHVPVVLVGTKL 149
            |.||||.|  |:::.|..:|..::..|||:||::..|..|.::.|:||||.|....||:|||.|.
Mosquito    76 LRLWDTFG--DHDKDRRFAYGRSDVVLLCFSIANPVSLRNCRAMWYPEIRKFCPDTPVILVGCKN 138

  Fly   150 DL--------------------RIPNSEKFVTTQEGKKMRKEIHAFNLVECSAKKKQNLQQVFEE 194
            ||                    |.......|...|.:.:.||: .....|.|......:.:|||.
Mosquito   139 DLRYMYRDETYLSYFGERSPFVRAARKSDLVMPDEARAVAKEL-GVAYYETSVFTYFGVNEVFEN 202

  Fly   195 AVRA 198
            |:||
Mosquito   203 AIRA 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoLNP_001247003.1 Rho 36..198 CDD:206641 56/197 (28%)
RhoBTBXP_061508134.1 None

Return to query results.
Submit another query.