DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoL and Rhoq

DIOPT Version :10

Sequence 1:NP_001247003.1 Gene:RhoL / 41136 FlyBaseID:FBgn0014380 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_663466.2 Gene:Rhoq / 104215 MGIID:1931553 Length:205 Species:Mus musculus


Alignment Length:183 Identity:89/183 - (48%)
Similarity:130/183 - (71%) Gaps:9/183 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LKITIVGDGMVGKTCMLITYTRNEFPEEYIPTVFDNHACNIAVDDRDYNLTLWDTAGQEDYERLR 100
            ||..:||||.|||||:|::|..:.|||||:|||||::|.::.|..:.|.|.|:||||||||:|||
Mouse    10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDYDRLR 74

  Fly   101 PLSYPSTNCFLLCYSISSRTSFENVKSKWWPEIRHFSAHVPVVLVGTKLDLR-IPNS-------- 156
            |||||.|:.||:|:|:.:..||:|||.:|.||::.::.:||.:|:||::||| .|.:        
Mouse    75 PLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPKTLARLNDMK 139

  Fly   157 EKFVTTQEGKKMRKEIHAFNLVECSAKKKQNLQQVFEEAVRAVERKPKTTSKQ 209
            ||.|..::|:|:.|||.|...|||||..::.|:.||:||:.|:....|.|.|:
Mouse   140 EKPVCVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTPKKHTVKK 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoLNP_001247003.1 Rho 36..198 CDD:206641 85/170 (50%)
RhoqNP_663466.2 Tc10 10..183 CDD:206707 86/172 (50%)
Effector region. /evidence=ECO:0000250 38..46 6/7 (86%)

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