DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RhoL and rhobtb3

DIOPT Version :10

Sequence 1:NP_001247003.1 Gene:RhoL / 41136 FlyBaseID:FBgn0014380 Length:214 Species:Drosophila melanogaster
Sequence 2:XP_031749224.1 Gene:rhobtb3 / 100485375 XenbaseID:XB-GENE-983321 Length:592 Species:Xenopus tropicalis


Alignment Length:133 Identity:33/133 - (24%)
Similarity:56/133 - (42%) Gaps:43/133 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 YSISSRTSFENVKSKWWPEIRHFSAH--VPVVL--VGTKLDLRIP------NSEK--FVTTQEGK 166
            ||::::||:.:||..:.|.||...:|  |||::  ||::::...|      .|::  .||..||.
 Frog    90 YSVNAKTSYLDVKDNFVPLIRQIFSHCTVPVIVAAVGSRVNDGPPCSCPLCTSDRGISVTASEGI 154

  Fly   167 KMRK-------EIHAFN------------------------LVECSAKKKQNLQQVFEEAVRAVE 200
            ::.|       |:||.|                        ..:|..||...:.:|....:...|
 Frog   155 QLAKDLAATYMELHALNDFYVGSYFGGVLEYFIIQTLNTKTSAKCKKKKNNQVLKVKPPNLEQPE 219

  Fly   201 RKP 203
            |.|
 Frog   220 RMP 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoLNP_001247003.1 Rho 36..198 CDD:206641 30/126 (24%)
rhobtb3XP_031749224.1 P-loop containing Nucleoside Triphosphate Hydrolases <83..175 CDD:476819 26/84 (31%)
BTB_POZ 227..372 CDD:453885
BTB2_POZ_RHOBTB3 391..500 CDD:349669
BACK_RHOBTB3 510..592 CDD:350607
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.