DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoL and LOC100331257

DIOPT Version :9

Sequence 1:NP_001247003.1 Gene:RhoL / 41136 FlyBaseID:FBgn0014380 Length:214 Species:Drosophila melanogaster
Sequence 2:XP_009302572.2 Gene:LOC100331257 / 100331257 -ID:- Length:186 Species:Danio rerio


Alignment Length:156 Identity:32/156 - (20%)
Similarity:49/156 - (31%) Gaps:49/156 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 MVGKTCM--LITYTRNEFPEEYIPTVFDNHACNIAVDDRD-------------YNLTLWDTAGQE 94
            :..:.|:  |:..|     |.|..||....|...|..|.|             :.||.|      
Zfish    41 LANRLCLPHLVALT-----ELYTVTVLTEAAMMGADIDGDVLLYLDMAQFHCAHQLTDW------ 94

  Fly    95 DYERLRPLSYPSTNCFLLCYSISSRTSFENVKSKWWPEIRHFSAH--VPVVLVGTKLDLRIPNSE 157
                  .|.:..||...:|     |....::|:|......||..|  .||..:          .|
Zfish    95 ------CLHHVCTNYNRVC-----RKFPRDMKAKSTDNQEHFEKHRWPPVWYL----------KE 138

  Fly   158 KFVTTQEGKKMRKEIHAFNLVECSAK 183
            :....:..|:..||.:.:...:|..|
Zfish   139 EDHYQRARKEREKEDYLYQKRQCKRK 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoLNP_001247003.1 Rho 36..198 CDD:206641 32/156 (21%)
RHO 38..202 CDD:197554 32/156 (21%)
LOC100331257XP_009302572.2 BTB <5..55 CDD:333434 3/18 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24072
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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