DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoL and rhov

DIOPT Version :10

Sequence 1:NP_001247003.1 Gene:RhoL / 41136 FlyBaseID:FBgn0014380 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_001122131.1 Gene:rhov / 100038217 XenbaseID:XB-GENE-489435 Length:240 Species:Xenopus tropicalis


Alignment Length:213 Identity:81/213 - (38%)
Similarity:126/213 - (59%) Gaps:17/213 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 DERGKKPGMTANITK-SPRP------LKITIVGDGMVGKTCMLITYTRNEFPEEYIPTVFDNHAC 74
            |::...|.::..:.| :.||      :|..:||||.||||.::|:||.|.:|.||.||..|..:.
 Frog    11 DQKRLSPQLSELLCKQNSRPNSQELGIKCVLVGDGAVGKTSLVISYTINGYPTEYQPTALDTFSV 75

  Fly    75 NIAVDDRDYNLTLWDTAGQEDYERLRPLSYPSTNCFLLCYSISSRTSFENVKSKWWPEIRHFSAH 139
            .:.||.....:.|.|||||||::.||.|.|..|:.||:|:|:.:.:||:||..||.||||..|.|
 Frog    76 QVLVDGAPVRIQLCDTAGQEDFDHLRSLCYAETDVFLVCFSVVNPSSFQNVTEKWIPEIRTHSPH 140

  Fly   140 VPVVLVGTKLDLR--------IPNSE-KFVTTQEGKKMRKEIHAFNLVECSAKKKQNLQQVFEEA 195
            .|:|||||:.|||        :..|. |.|:..:.:.:.::|.|...:||||..::||::||:.:
 Frog   141 TPIVLVGTQADLRDDVNVLINLSRSHVKPVSESQAQAVAQKIRAQTYIECSALTQKNLKEVFDAS 205

  Fly   196 V-RAVERKPKTTSKQSCK 212
            : .|::.|.:...|.:.|
 Frog   206 ILSAIKHKARLEKKLTSK 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoLNP_001247003.1 Rho 36..198 CDD:206641 72/171 (42%)
rhovNP_001122131.1 Wrch_1 37..209 CDD:133330 72/171 (42%)

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