DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoL and rhobtb1

DIOPT Version :10

Sequence 1:NP_001247003.1 Gene:RhoL / 41136 FlyBaseID:FBgn0014380 Length:214 Species:Drosophila melanogaster
Sequence 2:XP_002937150.1 Gene:rhobtb1 / 100038184 XenbaseID:XB-GENE-484718 Length:691 Species:Xenopus tropicalis


Alignment Length:201 Identity:60/201 - (29%)
Similarity:99/201 - (49%) Gaps:39/201 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 RP----LKITIVGDGMVGKTCML------ITYTRNEFPEEYIPTVF--DNH-AC-------NIAV 78
            ||    :|..:|||..||||.::      .|.|:.:....::|||:  |.: .|       ...|
 Frog     9 RPNVETIKCVVVGDNAVGKTRLICARACNTTLTQYQLLATHVPTVWAIDQYRVCQEVLERSRDVV 73

  Fly    79 DDRDYNLTLWDTAGQEDYERLRPLSYPSTNCFLLCYSISSRTSFENVKSKWWPEIRHFSAHVPVV 143
            |:...:|.||||.|  |:.:.|..:|..::..:||:||::..|..:||:.|..||:||....||:
 Frog    74 DEVSVSLRLWDTFG--DHHKDRRFAYGRSDVVVLCFSIANPNSLNHVKTMWAQEIKHFCPRTPVI 136

  Fly   144 LVGTKLDLRIPNSE----------------KFVTTQEGKKMRKEIHAFNLVECSAKKKQNLQQVF 192
            |||.:||||..:.|                ..:..::|:::.||: .....|.|...:..::.||
 Frog   137 LVGCQLDLRYADLEAVNRARRPLARPIKRGDILPPEKGREVAKEL-GIPYYETSVFDQFGIKDVF 200

  Fly   193 EEAVRA 198
            :.|:||
 Frog   201 DNAIRA 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoLNP_001247003.1 Rho 36..198 CDD:206641 56/193 (29%)
rhobtb1XP_002937150.1 RhoBTB 13..207 CDD:133275 58/197 (29%)
BTB1_POZ_RHOBTB1 248..454 CDD:349664
BTB2_POZ_RHOBTB1 459..584 CDD:349667
BACK_RHOBTB1 587..686 CDD:350605
Blue background indicates that the domain is not in the aligned region.

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