DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phu and alpi.1

DIOPT Version :9

Sequence 1:NP_649897.4 Gene:phu / 41135 FlyBaseID:FBgn0043791 Length:546 Species:Drosophila melanogaster
Sequence 2:XP_002937387.2 Gene:alpi.1 / 548375 XenbaseID:XB-GENE-854726 Length:529 Species:Xenopus tropicalis


Alignment Length:498 Identity:206/498 - (41%)
Similarity:299/498 - (60%) Gaps:40/498 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 FDAVRSEERYAEYWQGLAAQTLDQQLESKLRLNTQLARNVMLFIGDGMSIPTITAGRVYLG---- 116
            :..:.:||...|:|.......:::.|  ||:.....|:|::||:||||.:||:||.|:..|    
 Frog    21 YATIPAEESQPEFWNNKMISRINEAL--KLKPIQHRAKNLILFLGDGMGVPTVTATRILSGQMKR 83

  Fly   117 --GEEKQFAFEQFPYVGLSKTYCANMQVADSACTATAYLGGVKANYGTIGVSAAVQFKDCQAQAQ 179
              |||.:.|.::|||..|||||..:.||.|||.|||||..||||||||:||:|||:..:|  ...
 Frog    84 MLGEENELAMDKFPYTALSKTYNVDRQVPDSAGTATAYNCGVKANYGTVGVTAAVKRSNC--SNM 146

  Fly   180 AAHHVSSIAAWAQKQGMATGLVTTTSVTHASPAGVYAHLANRNWENDAEVVGDN---GDPDLCPD 241
            ..:.|.|:...|:..|.:.|:||||.|.||||:|.|||:.:|:|.:||.:..|.   |    |.|
 Frog   147 KGNEVESVLKKAKAAGKSVGIVTTTRVQHASPSGTYAHIPDRDWYSDANMPADAVNFG----CKD 207

  Fly   242 AAAQLINSPVGQKLNVIMGGGRENFLPKGVTD-----SSGAPGRRLDGRNLIDEW--KNQHTNSA 299
            .|.|||::   ..::||:||||:...|.|.:|     .....|.|.|||||||||  ||:   .|
 Frog   208 IAQQLISN---VDIDVILGGGRKYMTPVGTSDPEYPADKKQNGIRKDGRNLIDEWLRKNK---GA 266

  Fly   300 QYVENRRELLNLSNHTSR-VLGLFAPYHMAYHLDASPAEQPTLEEMVQSAMEILERQSAGRGYFL 363
            |||.|:.:|..::..|:: |:|||.|..|.|.|:.:....|::.|:.:.|:.:|:|..  .|::|
 Frog   267 QYVWNKEQLDKINVSTAKHVMGLFEPADMKYELNRNITTDPSIVELTEIAIRLLQRNP--NGFYL 329

  Fly   364 FVEGGRIDHGHHDTLALRAIDETAEFDKAVRFARSHTSTDDTLIVVSSDHSHTMSLAGYSSRKND 428
            |||||||||||||..|.:|:.|...||:|::.|...|:..|||.||::||||..:..||:.|.:.
 Frog   330 FVEGGRIDHGHHDGQAKQALTEGVMFDRAIKIAGQLTNEMDTLTVVTADHSHVFTFGGYTYRGSS 394

  Fly   429 IFGINDGQLAADDLPYATLSYANGPGYDSNYLREGGAVRRKNLRAINMKNKDFMFPSTVPLESET 493
            |||:.. :.|.|:..|.::.|.||||:  |...:|    |.|:.:...:...::..:.|||:|||
 Frog   395 IFGLAP-KKAFDNKSYTSILYGNGPGF--NLTGQG----RPNVDSNISEEVGYLQQAAVPLDSET 452

  Fly   494 HGGDDVAVFASGPYAQLFTGVFEQHFIPHALGYASCLSDRNMC 536
            |||:|||:|:.||.:.||.||.||.::.|.:.||:||.....|
 Frog   453 HGGEDVAIFSKGPMSHLFHGVQEQTYVAHVMAYAACLPPYKDC 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phuNP_649897.4 PhoA 71..524 CDD:224699 197/469 (42%)
alkPPc 93..530 CDD:214515 195/453 (43%)
alpi.1XP_002937387.2 Alk_phosphatase 55..489 CDD:333956 196/454 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 372 1.000 Domainoid score I883
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 382 1.000 Inparanoid score I2005
OMA 1 1.010 - - QHG48882
OrthoDB 1 1.010 - - D216917at33208
OrthoFinder 1 1.000 - - FOG0000192
OrthoInspector 1 1.000 - - mtm9329
Panther 1 1.100 - - O PTHR11596
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X159
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1111.080

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