DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phu and Alp2

DIOPT Version :9

Sequence 1:NP_649897.4 Gene:phu / 41135 FlyBaseID:FBgn0043791 Length:546 Species:Drosophila melanogaster
Sequence 2:NP_611654.1 Gene:Alp2 / 37539 FlyBaseID:FBgn0283480 Length:538 Species:Drosophila melanogaster


Alignment Length:558 Identity:232/558 - (41%)
Similarity:318/558 - (56%) Gaps:63/558 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 HDAERR-MHPVF----SLMGTG-----------------------SNPIGGGRYKRAMPQIVFDA 58
            |.::|| ::|:|    :.:||.                       |..:..|:|           
  Fly     2 HISQRRCLYPIFLFLLAFVGTALGRVQEVHNVLELTGQKASKLRFSTDVATGKY----------- 55

  Fly    59 VRSEERYAEYWQGLAAQTLDQQLESKLRL---NTQLARNVMLFIGDGMSIPTITAGRVYLG---- 116
            ...||...::|..||    |:::..:|:|   |:..|:||::|:||||.|.|:||.|:..|    
  Fly    56 TPPEEMDPQFWYKLA----DEEIAKRLQLPQPNSDRAKNVIMFLGDGMPISTVTAARILKGQRQG 116

  Fly   117 --GEEKQFAFEQFPYVGLSKTYCANMQVADSACTATAYLGGVKANYGTIGVSAAVQFKDCQAQAQ 179
              |||...:||:|||.|||:|||||.||.||||||||||.|||.|...|||||||.|.:|.|...
  Fly   117 NTGEESSLSFEKFPYSGLSRTYCANAQVPDSACTATAYLCGVKTNIINIGVSAAVNFNNCTASQD 181

  Fly   180 AAHHVSSIAAWAQKQGMATGLVTTTSVTHASPAGVYAHLANRNWENDAEVVGDNGDPDLCPDAAA 244
            .|:.::|||.|||..|.:||.||||::|||||:|.||..|||.|::|.:|.....|...|.|.|.
  Fly   182 PANRLTSIAEWAQNAGKSTGFVTTTTLTHASPSGAYAKTANRMWQSDTDVTSYGVDASTCVDMAT 246

  Fly   245 QLINSPVGQKLNVIMGGGRENFLPKGVTDSSGAPGRRLDGRNLIDEWKNQHTNSAQYVENRRELL 309
            ||:....|:...|:.|||...||||...||.|..|.|.||.||:..|:..| :....|.||::||
  Fly   247 QLVTQTPGKNFEVMFGGGMGKFLPKTTKDSHGKYGERSDGVNLLSRWQGLH-DKGVLVTNRKQLL 310

  Fly   310 NLS-NHTSRVLGLFAPYHMAYHLDASPAEQPTLEEMVQSAMEILERQSAGRGYFLFVEGGRIDHG 373
            ||. :..|.::|.|....|.:|:||.|..||||.|:.:.|::.|....  .|||:|:|||.||:|
  Fly   311 NLDVSAASSIIGTFQSGLMDFHMDADPTYQPTLSELTEVAIKKLSHNE--NGYFVFIEGGLIDYG 373

  Fly   374 HHDTLALRAIDETAEFDKAVRFARSHTSTDDTLIVVSSDHSHTMSLAGYSSRKNDIFGINDGQLA 438
            :|.|.|..|:||..||:||::.||..|:..||||||::||.|.:|:|||..|...|.|:|.....
  Fly   374 NHYTQAGYALDEALEFEKAIQLAREMTNISDTLIVVTADHGHAVSIAGYPGRGTPILGLNQHDTD 438

  Fly   439 ADDLPYATLSYANGPGYDSNYLREGGAVRRKNLRAINMKNKDFMFPSTVPLESETHGGDDVAVFA 503
            .:.:.|:.|:||.||   :.||.|.|  :|..|..| :...|.:.||.:..|...|.|:||.::|
  Fly   439 INGVKYSVLNYAAGP---NQYLDEHG--QRIPLDDI-LGPDDAISPSYIDKEIGVHSGEDVGIWA 497

  Fly   504 SGPYAQLFTGVFEQHFIPHALGYASCL-SDRNMCVDGG 540
            |||.:.|||||.:|..|||.:.||||: |.:.:|...|
  Fly   498 SGPQSHLFTGVMQQSTIPHLMAYASCVGSGKQVCGSSG 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phuNP_649897.4 PhoA 71..524 CDD:224699 212/462 (46%)
alkPPc 93..530 CDD:214515 208/443 (47%)
Alp2NP_611654.1 ALP_like 89..525 CDD:304875 209/444 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466651
Domainoid 1 1.000 363 1.000 Domainoid score I896
eggNOG 1 0.900 - - E1_COG1785
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 146 1.000 Inparanoid score I224
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D216917at33208
OrthoFinder 1 1.000 - - FOG0000192
OrthoInspector 1 1.000 - - mtm8903
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11596
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X159
109.900

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