DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phu and Alpg

DIOPT Version :9

Sequence 1:NP_649897.4 Gene:phu / 41135 FlyBaseID:FBgn0043791 Length:546 Species:Drosophila melanogaster
Sequence 2:XP_038940610.1 Gene:Alpg / 367308 RGDID:1565100 Length:533 Species:Rattus norvegicus


Alignment Length:500 Identity:210/500 - (42%)
Similarity:288/500 - (57%) Gaps:36/500 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 QIVFDAVRSEERYAEYWQGLAAQTLDQQLESKLRLNTQLARNVMLFIGDGMSIPTITAGRVYLG- 116
            |:.|..:..||....:|...|.:.||  :..||:.....|:|:::|:||||.:||:||.|:..| 
  Rat    17 QLSFGVIPVEEENPAFWNQKAKEALD--VAKKLKPIRTSAKNLIIFLGDGMGVPTVTATRILKGQ 79

  Fly   117 -----GEEKQFAFEQFPYVGLSKTYCANMQVADSACTATAYLGGVKANYGTIGVSAAVQFKDCQA 176
                 |.|...|.:.||:..|||||..:.||.|||.||||||.||||||.|||||||.:|..|  
  Rat    80 LGGHLGPETPLAMDHFPFTALSKTYNVDRQVPDSAGTATAYLCGVKANYKTIGVSAAARFNQC-- 142

  Fly   177 QAQAAHHVSSIAAWAQKQGMATGLVTTTSVTHASPAGVYAHLANRNWENDAEVVG---DNGDPDL 238
            .:...:.|.|:...|:|.|.:.|:||||||.||||||.|||..|.:|.:||.:..   ..|    
  Rat   143 NSTFGNEVFSVMHRAKKAGKSVGVVTTTSVQHASPAGTYAHTVNCDWYSDAHMATAALQEG---- 203

  Fly   239 CPDAAAQLINSPVGQKLNVIMGGGRENFLPKGVTD-----SSGAPGRRLDGRNLIDEWKNQHTNS 298
            |.|.|.|||::   ..::||:||||:...|||..|     :....|.||||:||:.:|..:| ..
  Rat   204 CKDIAMQLISN---MDIDVILGGGRKFMFPKGTPDPEYSGNRAQSGTRLDGQNLVQKWLAKH-QG 264

  Fly   299 AQYVENRRELLNLSNHT--SRVLGLFAPYHMAYHLDASPAEQPTLEEMVQSAMEILERQSAGRGY 361
            |:||.||.||:..|..:  :.::|||.|..|.|.:...|.:.|:|.||.:.|:.:|.|..  :|:
  Rat   265 ARYVWNRTELIQASQDSAVTHLMGLFEPNDMKYDIYRDPTQDPSLAEMTEVAVHLLSRNP--KGF 327

  Fly   362 FLFVEGGRIDHGHHDTLALRAIDETAEFDKAVRFARSHTSTDDTLIVVSSDHSHTMSLAGYSSRK 426
            :||||||.||||||:::|.||:.|...||.||..|...||..||:|:|::||||..|..||..|.
  Rat   328 YLFVEGGHIDHGHHESIAYRALTEAVMFDSAVDKANKLTSEKDTMILVTADHSHVFSFGGYVPRG 392

  Fly   427 NDIFGINDGQLAADDLPYATLSYANGPGYDSNYLREGGAVRRKNLRAINMKNKDFMFPSTVPLES 491
            ..|||:.....|.|..|:.::.|.|||||.   |.:|   .|.::.....::..:...:.|||.|
  Rat   393 TSIFGLGASFNALDGRPFTSILYGNGPGYK---LEKG---TRPDVTDKESRDPKYRQQAAVPLSS 451

  Fly   492 ETHGGDDVAVFASGPYAQLFTGVFEQHFIPHALGYASCLSDRNMC 536
            |||.|:|||:||.||.|.|..||.||::|.|.:.:|.||.....|
  Rat   452 ETHSGEDVAIFARGPQAHLVHGVQEQNYIAHVMAFAGCLEPYTDC 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phuNP_649897.4 PhoA 71..524 CDD:224699 201/468 (43%)
alkPPc 93..530 CDD:214515 196/452 (43%)
AlpgXP_038940610.1 Alk_phosphatase 54..490 CDD:395188 197/453 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351471
Domainoid 1 1.000 373 1.000 Domainoid score I856
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48882
OrthoDB 1 1.010 - - D216917at33208
OrthoFinder 1 1.000 - - FOG0000192
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100381
Panther 1 1.100 - - O PTHR11596
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X159
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.860

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