DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment phu and Alpi

DIOPT Version :9

Sequence 1:NP_649897.4 Gene:phu / 41135 FlyBaseID:FBgn0043791 Length:546 Species:Drosophila melanogaster
Sequence 2:NP_073156.3 Gene:Alpi / 24197 RGDID:2099 Length:540 Species:Rattus norvegicus


Alignment Length:499 Identity:209/499 - (41%)
Similarity:285/499 - (57%) Gaps:41/499 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 FDAVRSEERYAEYWQGLAAQTLDQQLESKLRLNTQLARNVMLFIGDGMSIPTITAGRVYLG---- 116
            |..:..||....:|...|.:.||  :..||:.....|:|::||:||||.:||:||.|:..|    
  Rat    19 FGVIPVEEENPVFWNQKAKEALD--VAKKLQPIQTSAKNLILFLGDGMGVPTVTATRILKGQLGG 81

  Fly   117 --GEEKQFAFEQFPYVGLSKTYCANMQVADSACTATAYLGGVKANYGTIGVSAAVQFKDCQAQAQ 179
              |.|...|.:.||:..|||||..:.||.|||.||||||.||||||.|||||||.:|..|  .:.
  Rat    82 HLGPETPLAMDHFPFTALSKTYNVDRQVPDSAGTATAYLCGVKANYKTIGVSAAARFNQC--NST 144

  Fly   180 AAHHVSSIAAWAQKQGMATGLVTTTSVTHASPAGVYAHLANRNWENDAEVVGDNGDPDLCPDAAA 244
            ..:.|.|:...|:|.|.:.|:||||.|.||||||.|||..||:|.:||: :..:...:.|.|.|.
  Rat   145 FGNEVFSVMHRAKKAGKSVGVVTTTRVQHASPAGTYAHTVNRDWYSDAD-MPSSALQEGCKDIAT 208

  Fly   245 QLINSPVGQKLNVIMGGGRENFLPKGVTD-----SSGAPGRRLDGRNLIDEW--KNQHTNSAQYV 302
            |||::   ..::||:||||:...|||..|     .|...|.|||.|||::||  |.|.|   :||
  Rat   209 QLISN---MDIDVILGGGRKFMFPKGTPDPEYPGDSDQSGVRLDSRNLVEEWLAKYQGT---RYV 267

  Fly   303 ENRRELLNLSNH--TSRVLGLFAPYHMAYHLDASPAEQPTLEEMVQSAMEILERQSAGRGYFLFV 365
            .||.:|:..|..  .:|::|||.|..|.|.::.:.:..|:|.||.:.|:.:|.|..  :|::|||
  Rat   268 WNREQLMQASQDPAVTRLMGLFEPAEMKYDVNRNASADPSLAEMTEVAVRLLSRNP--QGFYLFV 330

  Fly   366 EGGRIDHGHHDTLALRAIDETAEFDKAVRFARSHTSTDDTLIVVSSDHSHTMSLAGYSSRKNDIF 430
            ||||||.|||...|..|:.|...||.|:..|...|:..|||.::::||||..:..||:.|...||
  Rat   331 EGGRIDQGHHAGTAYLALTEAVMFDSAIEKASQLTNEKDTLTLITADHSHVFAFGGYTLRGTSIF 395

  Fly   431 G---INDGQLAADDLPYATLSYANGPGYDSNYLREGGAVRRKNLRAINMKNKDFMFPSTVPLESE 492
            |   :|    |.|...|.::.|.|||||   .|..|   .|.|:......:.::...:.|||.||
  Rat   396 GLAPLN----AQDGKSYTSILYGNGPGY---VLNSG---NRPNVTDAESGDVNYKQQAAVPLSSE 450

  Fly   493 THGGDDVAVFASGPYAQLFTGVFEQHFIPHALGYASCLSDRNMC 536
            ||||:|||:||.||.|.|..||.||::|.|.:.:|.||.....|
  Rat   451 THGGEDVAIFARGPQAHLVHGVQEQNYIAHVMAFAGCLEPYTDC 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
phuNP_649897.4 PhoA 71..524 CDD:224699 201/470 (43%)
alkPPc 93..530 CDD:214515 196/454 (43%)
AlpiNP_073156.3 Alk_phosphatase 53..488 CDD:278666 197/455 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351445
Domainoid 1 1.000 373 1.000 Domainoid score I856
eggNOG 1 0.900 - - E1_COG1785
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48882
OrthoDB 1 1.010 - - D216917at33208
OrthoFinder 1 1.000 - - FOG0000192
OrthoInspector 1 1.000 - - mtm8918
orthoMCL 1 0.900 - - OOG6_100381
Panther 1 1.100 - - O PTHR11596
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X159
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.760

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