DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16779 and Zfp541

DIOPT Version :10

Sequence 1:NP_649896.2 Gene:CG16779 / 41134 FlyBaseID:FBgn0037698 Length:2005 Species:Drosophila melanogaster
Sequence 2:NP_001092747.1 Gene:Zfp541 / 666528 MGIID:3647699 Length:1363 Species:Mus musculus


Alignment Length:548 Identity:113/548 - (20%)
Similarity:179/548 - (32%) Gaps:168/548 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 KFSKQPTRPE--KGLSAKLVVNVPPVIISPSKNAIIHKKVGADLIFECKAEGAPSPEITWSRNEQ 145
            |...:|..|:  |...:|..:.:|.|.:|.|...|...:.|||...:...:....|||.:.    
Mouse  2053 KKKNEPQDPKGPKVKGSKFNIGMPKVKVSASGTDINKTEKGADANLKADLQAPKIPEIDFD---- 2113

  Fly   146 IISTSPVLTLSNLEEGDK---------GLYTCLAVNIEGNST------SSIDV------------ 183
             |.|:.|.|  |..||||         |:......:.|.|.|      .||.|            
Mouse  2114 -IGTAQVET--NFSEGDKKQKIKIPKFGIPLPSLTSPEANITPLQIKGHSIPVDSEVEYEGPRLP 2175

  Fly   184 RFTKATILDLIPLNKTVIEGSNVFWHCHANAQATAISYSWLFEKKPIKTTSLGLRSNIRSGDLSL 248
            :.|||..:.:.|..:              ::.:.|...|...||:.:|.|.:.::.:..      
Mouse  2176 KVTKAVFVMVNPQTE--------------SSASAAGETSAEIEKEKLKQTKITMKQSFG------ 2220

  Fly   249 QDVRKSDSGWYTCEAKNSAGETTSSTAYLHVFYPPEPLSSHQPVQTVASGRNTTVSCDVIANPTP 313
               :.::.|......:....|..|.|..|.:           |..|.:||:..  |.||    ||
Mouse  2221 ---KSTEKGKAIHYGEEVEFEGKSKTGKLKL-----------PKVTFSSGQKG--SFDV----TP 2265

  Fly   314 TSYTWSKNGHYLPTQASSHIIISYAKPGDGGIYGCQADNIAGKGSIVETHLIVAEPPVFTVAPPS 378
            :.   |.:|               |.|   .:.|...|..|..|.:....|....|  ::.....
Mouse  2266 SG---SDDG---------------ASP---SLNGGDKDERAKFGKLKLPKLEFFSP--YSKDTEE 2307

  Fly   379 EIKVRLGDQVSIPCQGFGDPMPIVYW-IRDKK--RINQSTLTF---KKVEHLDHGAYECVVANSV 437
            |:::.:..:.|              | :::.|  :...||::|   ||....|....|   ..::
Mouse  2308 ELEISMRKETS--------------WELKETKETKTTSSTMSFPGLKKKPGKDEEVQE---IGTL 2355

  Fly   438 ETISTRVMLLVE---ITKPQMASSIKFTCLNSSSMR--ISWTPGYNGGFDQTFAVHAQNDVTLQW 497
            .:...|..:|.|   ...|....|..|..|..|..|  .:|           |.|   ..|||  
Mouse  2356 VSSKARTEMLAEREGSESPAHIESAGFVSLKKSEEREETTW-----------FKV---PKVTL-- 2404

  Fly   498 TSIKTSLNETILDHLEPFVSYRVSIESVNAKGSTN-----------STTYNRRSCTSLHAPDKLY 551
                 |.:.|.:.|:.|..|.:.|..|:  .||:.           |..|..:..:|.|...|  
Mouse  2405 -----SPHSTGILHITPESSPKASKSSI--PGSSEQASGGFYVKMPSVEYLTQEMSSEHTTSK-- 2460

  Fly   552 FCGYNELCWTAAEGASSYRIESRTEPSK 579
                .|...|.....:.| .|::|..||
Mouse  2461 ----TEGTRTVVTKMTKY-TETKTSSSK 2483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16779NP_649896.2 C2H2 Zn finger 329..349 CDD:275368 3/19 (16%)
zf-C2H2 355..377 CDD:395048 3/21 (14%)
C2H2 Zn finger 357..377 CDD:275368 3/19 (16%)
C2H2 Zn finger 385..407 CDD:275368 2/22 (9%)
ELM2 1646..1696 CDD:460214
SANT 1738..1782 CDD:473887
C2H2 Zn finger 1810..1832 CDD:275368
zf-C2H2_6 1952..1975 CDD:433576
C2H2 Zn finger 1954..1974 CDD:275368
Zfp541NP_001092747.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
COG5236 <80..>329 CDD:227561
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 106..137
C2H2 Zn finger 142..162 CDD:275368
zf-C2H2 168..190 CDD:395048
C2H2 Zn finger 170..190 CDD:275368
C2H2 Zn finger 198..216 CDD:275368
PHA03247 <231..677 CDD:223021
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 232..269
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 286..387
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 440..532
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 574..741
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 935..978
ELM2 1065..1120 CDD:460214
SANT 1175..1218 CDD:473887
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1243..1298
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1343..1363
Blue background indicates that the domain is not in the aligned region.

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