DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16779 and mideasb

DIOPT Version :10

Sequence 1:NP_649896.2 Gene:CG16779 / 41134 FlyBaseID:FBgn0037698 Length:2005 Species:Drosophila melanogaster
Sequence 2:XP_009291493.1 Gene:mideasb / 560411 ZFINID:ZDB-GENE-131121-13 Length:1095 Species:Danio rerio


Alignment Length:1145 Identity:254/1145 - (22%)
Similarity:385/1145 - (33%) Gaps:383/1145 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  1100 PESGQANSGSGSVSGANTTPLPTFQQFHSKELIMQNSSQIQAIASMRGSGGGVLASPLHSPLAYP 1164
            |.||..::.||.|...|    |...:.:...:|.......|:    ||          |.....|
Zfish    47 PPSGPGHNDSGGVESFN----PEASRMYHNSVIFSPEKGDQS----RG----------HYQQTMP 93

  Fly  1165 TPPSSHENMAQSSPFIEDAAAQFVDASNTFFGDKTDFSHIYFKTDEGEATIEQLNEHDNEKILKL 1229
            ...:..:...|..| ..::.:|...|....||.        :.|.:. |..:|:  |:...:.:.
Zfish    94 LKWTHQDPSLQPQP-RPNSWSQGTTAWQQNFGP--------YLTPQA-AFAKQM--HEGISVQQQ 146

  Fly  1230 KSVLEDSSFDPSIKVEDLLNGTDDDTECDLREFAETNLSFLDEDQEFLNDSR-NATSPLSESFFT 1293
            :...|.|:...:.|..::...|..|....:|...|     .|:.|.|....: ...:|......|
Zfish   147 QQQSEPSAIRTTEKQANMTGETYRDATKPVRGMGE-----WDQQQAFQQTQKPGMLNPQQHGQST 206

  Fly  1294 SGIGSAEDVKQVLREVLPDENMQLQLSSEQQGENIIDLYY--------LPGLGLQSQMMPNSEDP 1350
            :|       ..||:        ..||:..|..:|::..||        ||.|...||  .||:..
Zfish   207 TG-------NSVLQ--------PFQLAFGQPKQNLVAGYYQVVQGSRTLPNLNYSSQ--TNSQHQ 254

  Fly  1351 LLSSSPREFGQQRQQLPMQTTNMQQPMEQTLQDNNNIYQQQEQQQEQHQQQQSQQEQPPQQEQQ- 1414
            |         ||.||...|...:||..:|..|.    .:||:|||:|..|:|.||:|.||..:| 
Zfish   255 L---------QQLQQQEQQKLMLQQRQQQIEQQ----IRQQQQQQQQVLQRQKQQQQIPQSLEQA 306

  Fly  1415 -------QQHHQ----QLLMPQQPLNQTE------SLPAVGQQQGDFMLPLVGGH-----GFTQV 1457
                   |||.|    ||:..||...|:.      .:.:.|||.   ..||:..|     |.:|.
Zfish   307 HQLKQTPQQHMQQIQAQLVQQQQKSEQSHQNQHALGVYSDGQQP---HAPLLNQHHPSLSGQSQE 368

  Fly  1458 T---SQTQ---YIDNSQGGMGMQPLNSLLQPLLYGGATTS-----NGNASAGGNESLLTTDCQMN 1511
            |   |.||   .:......:..|.:.: .||    |...|     .|...|..|..::.:|....
Zfish   369 TTDPSSTQAQESVPQPPAAVSQQAIET-QQP----GPRRSRRLSKEGGGPASDNPFVIPSDLHAQ 428

  Fly  1512 ANQG------------QIDTGLMFAC---------GNTTTMANK--------------------S 1535
            .:|.            ...||::.:.         .|..|:|.|                    |
Zfish   429 GSQNGASETSMVQDIRAAPTGVIQSTRRKRRVSQEANLETLAQKASERESLPSRNVKQEPHRPWS 493

  Fly  1536 LAAIVSNP--------------PSVANLQPL---------------------------------- 1552
            ...:.:.|              |...:|.||                                  
Zfish   494 PPVVPTGPGRGAAEVDQVSAKRPRDDSLMPLVIPVSVPVRQTDSSSPDHEQASLSVSWPLRPSDM 558

  Fly  1553 --SNQTNSILKRRLRS--NAPQET--------------HKFSK---------------------- 1577
              ||...|::..|.||  |:|.|:              .|.:|                      
Zfish   559 SCSNYQPSVIVTRRRSLRNSPSESTGQNGGAESGSEADSKSAKAKRRPRPEPLFIPPPKLGTFIA 623

  Fly  1578 ---FHTLSPHRSKLRKPSR--------THYTPAPILNPDRKGTGLYCN----------------- 1614
               :.:::|.:|.||.|.|        ..|||.|||:|.|:|:|||.:                 
Zfish   624 PPAYSSITPFQSHLRSPVRLVDNPLNMPPYTPPPILSPVREGSGLYFSTFLSAAAAAAAAANNQV 688

  Fly  1615 -----VRKQLGQGLFDAFDDDFGDSV-----GLVDFSDESKVNLGSTYQAQIPSCRPLEEALRDS 1669
                 ..|...:.|..:...|....|     .....|.|.::|:|..|||::|..|....||.|.
Zfish   689 LPPPATPKSATRSLLRSNSSDITPPVLSAISEATPVSIEPRINIGVRYQAEVPELRERSAALHDL 753

  Fly  1670 PGAEMMWNP------EVQEDEKI--LMRYIDLSKSSAVPMGSHSEEVALQTLLRAKGNSAAAVLS 1726
            ..||::|.|      ..|:.:|:  ||.   |:.|||:..|..::|:|:..|...||:....:..
Zfish   754 HKAELVWAPLPDLEASAQQQQKVNDLMH---LACSSALFGGGTNQELAMHCLYECKGDIMGTLTH 815

  Fly  1727 LLQTQ--------------SGAFQMKWTAYELEQFLRGLEKNGKDFGKIASELQTKSSGECVQMY 1777
            ||..:              ||:  ..||..|...|.:|:....|||..:...:.:|:..:||:.|
Zfish   816 LLLKKNIFSKSHPLADYHYSGS--DSWTPEERRLFNKGIATYKKDFFMVQKLVSSKTVAQCVEFY 878

  Fly  1778 YFWKKLCVDYKV------THLKMEPVVVIAPAVEKPYVCEIADCSASFSSKAALHGHVRIHAYGR 1836
            |.:||   ..|:      .:.:.||:..      ||...|..|                      
Zfish   879 YTYKK---QVKIGRNGTLVYGETEPLET------KPTTEEEVD---------------------- 912

  Fly  1837 SASSNTTNNNSSSSNTGSSSNVQHAAASSASSGGNNNNSSSYACATLSGSNGSSNNASTNVAGAV 1901
                     |.||....|....:.:.....|......:|        .|....|..|:.|.|..:
Zfish   913 ---------NKSSQKLESRKEDEESRKWEGSCDRKQEDS--------PGRVTQSLQATENAAAVL 960

  Fly  1902 ATHSSNMAQNGSNCS-GH--------ANAAIATSALSTTPKLEAGMGNTTNIPIAKEGEFPCKVC 1957
            .....|..::.|... .|        :.:...|:|..|.|. ..|.|.|.     :|||||||.|
Zfish   961 VLSQENSTRHPSTLGVSHPPHPPQPPSKSRSDTAARKTGPS-NTGKGQTN-----QEGEFPCKKC 1019

  Fly  1958 GKVFNKVKSRSAHMKTHRVQEPD----QKHQLQNQAGAGL 1993
            |::|.||||||||||:|...|..    ::.:.:.:|.|.|
Zfish  1020 GRIFYKVKSRSAHMKSHAEAEKKAAALRQREAEQRAAAAL 1059

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16779NP_649896.2 C2H2 Zn finger 329..349 CDD:275368
zf-C2H2 355..377 CDD:395048
C2H2 Zn finger 357..377 CDD:275368
C2H2 Zn finger 385..407 CDD:275368
ELM2 1646..1696 CDD:460214 19/57 (33%)
SANT 1738..1782 CDD:473887 13/43 (30%)
C2H2 Zn finger 1810..1832 CDD:275368 2/21 (10%)
zf-C2H2_6 1952..1975 CDD:433576 17/22 (77%)
C2H2 Zn finger 1954..1974 CDD:275368 15/19 (79%)
mideasbXP_009291493.1 PHA03247 <357..749 CDD:223021 71/396 (18%)
ELM2 730..785 CDD:460214 19/57 (33%)
SANT 839..883 CDD:473887 13/43 (30%)
Blue background indicates that the domain is not in the aligned region.

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