DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstZ2 and vars1

DIOPT Version :9

Sequence 1:NP_649895.1 Gene:GstZ2 / 41133 FlyBaseID:FBgn0037697 Length:227 Species:Drosophila melanogaster
Sequence 2:NP_001298275.1 Gene:vars1 / 114427 ZFINID:ZDB-GENE-010601-1 Length:1271 Species:Danio rerio


Alignment Length:119 Identity:25/119 - (21%)
Similarity:53/119 - (44%) Gaps:22/119 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 PALQI---DGHTLIESVAIMHYLEETRPQRPLLPQDVHKRAKV--------REIVEIICSGIQPL 123
            |||.:   .|..|..:.|:..||..|..:   ...|..:.::|        .|:..:.|:...||
Zfish    45 PALVLAGAGGTVLSGTSAVSWYLAATGKR---AGSDKKQESQVWQWLSFAENELTPVACAVAFPL 106

  Fly   124 QNLIVLIHVGEEKK-KEWAQHWITRGFRAVEKALSTSAGKYCVGDEISMADCCL 176
            ..:     :|.:|| ::.::..:.|..:|::..|:...  :.||:.:::||..:
Zfish   107 LGI-----MGVDKKLQQSSRAELLRVLKALDGTLALRT--FLVGESVTLADAAV 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstZ2NP_649895.1 GST_N_Zeta 16..90 CDD:239340 7/22 (32%)
maiA 17..221 CDD:273527 25/119 (21%)
GST_C_Zeta 104..217 CDD:198300 15/82 (18%)
vars1NP_001298275.1 GstA <45..192 CDD:223698 25/119 (21%)
GST_C_ValRS_N 80..202 CDD:198327 15/81 (19%)
PTZ00419 291..1270 CDD:240411
ValRS_core 340..941 CDD:185677
tRNA-synt_1_2 518..643 CDD:290334
Anticodon_Ia_Val 941..1081 CDD:153416
Val_tRNA-synt_C 1203..1266 CDD:287436
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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