DRSC/TRiP Functional Genomics Resources

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Protein Alignment GstZ1 and Vars1

DIOPT Version :9

Sequence 1:NP_649894.1 Gene:GstZ1 / 41132 FlyBaseID:FBgn0037696 Length:246 Species:Drosophila melanogaster
Sequence 2:NP_445744.1 Gene:Vars1 / 25009 RGDID:3950 Length:1264 Species:Rattus norvegicus


Alignment Length:303 Identity:59/303 - (19%)
Similarity:93/303 - (30%) Gaps:112/303 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 GLYRSSWSKPLFRHLATK------PILYSYWPSSCSWRVRVA-LAIKKIDYDIKPTSLLKTVSGH 73
            ||:|.....|:...|..:      |:|...|...|....:.| .|:.:.|..|.|.:..:|  .|
  Rat   648 GLFRGIKDNPMVVPLCNRSKDVVEPLLRPQWYVRCGEMAQAASAAVTRGDLRILPEAHQRT--WH 710

  Fly    74 AYTDEYRE--VNPM----QKVPSLKIDGHTLCDSVAIIHYLEETRPQPALLP-QDPVKR------ 125
            ::.|..|:  ::..    .::|:..|..|                 .||:.| :||..|      
  Rat   711 SWMDNIRDWCISRQLWWGHRIPAYFITVH-----------------DPAVPPGEDPDGRYWVSGR 758

  Fly   126 --AKIRE---------------------IVELICSGIQPL---------QNVSV-----LDHIGK 153
              |:.||                     :.....||:.|.         :::||     |...|.
  Rat   759 TEAEAREKAAREFGVSPDKISLQQDEDVLDTWFSSGLFPFSIFGWPNQSEDLSVFYPGTLLETGH 823

  Fly   154 DQSLQWAQHWISRGFQGLEKVLSHSAGKFCVGDELSMADICLVPQVRNARRYKAD------LTPY 212
            |....|....:..|.:..||              |...::.|...||:|...|..      :.|.
  Rat   824 DILFFWVARMVMLGLKLTEK--------------LPFREVYLHAIVRDAHGRKMSKSLGNVIDPL 874

  Fly   213 PTI----------VRLNQELQELDVFKATH------PSTQPDC 239
            ..|          ..||..|...:|.||..      |:..|:|
  Rat   875 DVIHGVSLQGLHDQLLNSNLDPSEVEKAKEGQRADFPAGIPEC 917

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GstZ1NP_649894.1 GST_N_Zeta 34..109 CDD:239340 16/81 (20%)
maiA 35..240 CDD:273527 53/278 (19%)
GST_C_Zeta 122..236 CDD:198300 32/178 (18%)
Vars1NP_445744.1 GstA <56..203 CDD:223698
GST_C_family 92..213 CDD:295467
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 218..296
PTZ00419 282..1264 CDD:240411 59/303 (19%)
ValRS_core 335..938 CDD:185677 59/303 (19%)
'HIGH' region 344..354
tRNA-synt_1_2 513..640 CDD:290334
'KMSKS' region 862..866 1/3 (33%)
Anticodon_Ia_Val 938..1075 CDD:153416
Val_tRNA-synt_C 1196..1258 CDD:287436
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0625
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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